RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 ANXA13P27216 316 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 ATICP31939 592 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 PPP3CCP48454 512 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 CYP2J2P51589 502 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 AP3M2P53677 418 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 TNNC1P63316 161 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 LMNB2Q03252 620 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 GRSF1Q12849 480 aaKnown RBP eCLIP14.19□□□□□ -0.14
APOC1-209ENST00000592885 MTF1Q14872 753 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 ZNF77Q15935 545 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 TMEM196Q5HYL7 178 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 SDHAF4Q5VUM1 108 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 SCARA3Q6AZY7 606 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 Q6ZS52 159 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 SCN4BQ8IWT1 228 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 NELFCDQ8IXH7 590 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 CEP57L1Q8IYX8 460 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 CPA6Q8N4T0 437 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 DCLK2Q8N568 766 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 KIAA1958Q8N8K9 716 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 TTC8Q8TAM2 541 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 MYCBPAPQ8TBZ2 947 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 TMEM174Q8WUU8 243 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 SYAP1Q96A49 352 aaPredicted RBP14.19□□□□□ -0.14
APOC1-209ENST00000592885 MMS19Q96T76 1030 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 CRTAC1Q9NQ79 661 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 DLL3Q9NYJ7 618 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 USP25Q9UHP3 1055 aa14.19□□□□□ -0.14
APOC1-209ENST00000592885 KIAA1549LQ6ZVL6 1849 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 PRR5-ARHGAP8B1AHC4 643 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 CLIC2O15247 247 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 HCRTO43612 131 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 ATG13O75143 517 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 MYL1P05976 194 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 CKMP06732 381 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 SLFN14P0C7P3 912 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 LMO2P25791 158 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 PSMC1P62191 440 aaKnown RBP14.18□□□□□ -0.14
APOC1-209ENST00000592885 NOP14P78316 857 aaKnown RBP14.18□□□□□ -0.14
APOC1-209ENST00000592885 ARHGAP8P85298 464 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 KCNB1Q14721 858 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 CCDC142Q17RM4 750 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 KNOP1Q1ED39 458 aaKnown RBP14.18□□□□□ -0.14
APOC1-209ENST00000592885 FOXD4L5Q5VV16 416 aaPredicted RBP14.18□□□□□ -0.14
APOC1-209ENST00000592885 DENND5BQ6ZUT9 1274 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 STKLD1Q8NE28 680 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 OSCP1Q8WVF1 389 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 FOXD4L4Q8WXT5 416 aaPredicted RBP14.18□□□□□ -0.14
APOC1-209ENST00000592885 ATP2A3Q93084 1043 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 C8orf48Q96LL4 319 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 TTLL2Q9BWV7 592 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 BLZF1Q9H2G9 400 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 SNX25Q9H3E2 840 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 EBF3Q9H4W6 596 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 VRTNQ9H8Y1 702 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 TRPC7Q9HCX4 862 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 GCNT4Q9P109 453 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 RCOR1Q9UKL0 485 aa14.18□□□□□ -0.14
APOC1-209ENST00000592885 CCDC163A0A0D9SF12 145 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 CHURC1-FNTBB4DL54 471 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 EXOC3O60645 756 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 ATP2C2O75185 946 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 RETP07949 1114 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 DRD1P21728 446 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 BDNFP23560 247 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 GNL1P36915 607 aaPredicted RBP14.17□□□□□ -0.14
APOC1-209ENST00000592885 GRIK1P39086 918 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 CYP27A1Q02318 531 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 PSMD2Q13200 908 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 TRPC3Q13507 836 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 CUL4BQ13620 913 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 FBXO43Q4G163 708 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 TRIM68Q6AZZ1 485 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 DGLUCYQ7Z3D6 616 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 WDR5BQ86VZ2 330 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 SLC9A9Q8IVB4 645 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 RDH13Q8NBN7 331 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 RIN3Q8TB24 985 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 CCDC127Q96BQ5 260 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 PCED1BQ96HM7 432 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 ELOVL4Q9GZR5 314 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 SLC39A2Q9NP94 309 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 EXOC1Q9NV70 894 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 ARHGAP26Q9UNA1 814 aa14.17□□□□□ -0.14
APOC1-209ENST00000592885 ATP8B3O60423 1300 aa14.16□□□□□ -0.14
APOC1-209ENST00000592885 CEP250Q9BV73 2442 aa14.16□□□□□ -0.14
APOC1-209ENST00000592885 ACTN4O43707 911 aaKnown RBP14.16□□□□□ -0.14
APOC1-209ENST00000592885 FOXD2O60548 495 aaPredicted RBP14.16□□□□□ -0.14
APOC1-209ENST00000592885 CST3P01034 146 aaPredicted RBP14.16□□□□□ -0.14
APOC1-209ENST00000592885 AFMP43652 599 aa14.16□□□□□ -0.14
APOC1-209ENST00000592885 IFNAR2P48551 515 aa14.16□□□□□ -0.14
APOC1-209ENST00000592885 FNTBP49356 437 aa14.16□□□□□ -0.14
APOC1-209ENST00000592885 CLDN10P78369 228 aa14.16□□□□□ -0.14
APOC1-209ENST00000592885 DNM1Q05193 864 aaKnown RBP14.16□□□□□ -0.14
APOC1-209ENST00000592885 SIM2Q14190 667 aaPredicted RBP14.16□□□□□ -0.14
APOC1-209ENST00000592885 WDR72Q3MJ13 1102 aa14.16□□□□□ -0.14
APOC1-209ENST00000592885 MDH1BQ5I0G3 518 aa14.16□□□□□ -0.14
APOC1-209ENST00000592885 FSTL4Q6MZW2 842 aa14.16□□□□□ -0.14
APOC1-209ENST00000592885 OR6B3Q8NGW1 331 aa14.16□□□□□ -0.14
APOC1-209ENST00000592885 CCDC26Q8TAB7 109 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms