RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 PICK1Q9NRD5 415 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 CST8O60676 142 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 DIAPH2O60879 1101 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 PEX11AO75192 247 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 IFNB1P01574 187 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 KRT3P12035 628 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 TARSP26639 723 aaKnown RBP12.17□□□□□ -0.46
ZNF540-210ENST00000592533 GABRB2P47870 512 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 PLCB3Q01970 1234 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 RNASELQ05823 741 aaKnown RBP12.17□□□□□ -0.46
ZNF540-210ENST00000592533 MAPK6Q16659 721 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 IER5Q5VY09 327 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 FAM160B1Q5W0V3 765 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 ANKMY2Q8IV38 441 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 KIAA0319LQ8IZA0 1049 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 FAM13CQ8NE31 585 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 CYTH4Q9UIA0 394 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 HACL1Q9UJ83 578 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 HAO1Q9UJM8 370 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 AGTPBP1Q9UPW5 1226 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 BANF1O75531 89 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 TMEM63AO94886 807 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 TGDSO95455 350 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 RPSAP08865 295 aaKnown RBP12.16□□□□□ -0.46
ZNF540-210ENST00000592533 RXRBP28702 533 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 SSTR1P30872 391 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 GAD2Q05329 585 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 EFTUD2Q15029 972 aaKnown RBP eCLIP12.16□□□□□ -0.46
ZNF540-210ENST00000592533 ZNF699Q32M78 642 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 ANKRD20A2Q5SQ80 823 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 ANKRD20A1Q5TYW2 823 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 ANKRD20A3Q5VUR7 823 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 C3orf62Q6ZUJ4 267 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 SH2D5Q6ZV89 423 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 NLRP9Q7RTR0 991 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 FBXO36Q8NEA4 188 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 PRPF31Q8WWY3 499 aaKnown RBP12.16□□□□□ -0.46
ZNF540-210ENST00000592533 THOC1Q96FV9 657 aaKnown RBP12.16□□□□□ -0.46
ZNF540-210ENST00000592533 FAM167AQ96KS9 214 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 TBC1D10AQ9BXI6 508 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 PTPRHQ9HD43 1115 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 HOXC10Q9NYD6 342 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 KANSL3Q9P2N6 904 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 IGKV6-21A0A0C4DH24 114 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 DNAJC6O75061 913 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 SPAG6O75602 509 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 ENDOD1O94919 500 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
ZNF540-210ENST00000592533 CALB2P22676 271 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 ADRA1DP25100 572 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 NEK3P51956 506 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 TRPC3Q13507 836 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 MXD4Q14582 209 aaPredicted RBP12.16□□□□□ -0.46
ZNF540-210ENST00000592533 TSHZ1Q6ZSZ6 1077 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 XYLT1Q86Y38 959 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 RHPN2Q8IUC4 686 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 JOSD2Q8TAC2 188 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 PNPLA8Q9NP80 782 aa12.16□□□□□ -0.46
ZNF540-210ENST00000592533 TROVE2P10155 538 aaKnown RBP eCLIP12.15□□□□□ -0.46
ZNF540-210ENST00000592533 PTPN4P29074 926 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 ETV4P43268 484 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 SLC18A2Q05940 514 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 PLEKHG4Q58EX7 1191 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 BZW1Q7L1Q6 419 aaKnown RBP12.15□□□□□ -0.46
ZNF540-210ENST00000592533 CLNKQ7Z7G1 428 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 EXOC8Q8IYI6 725 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 PDIK1LQ8N165 341 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 TCP10LQ8TDR4 215 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 STK32AQ8WU08 396 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 RSAD2Q8WXG1 361 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 CAMKK2Q96RR4 588 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 C2orf40Q9H1Z8 148 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 LRRC42Q9Y546 428 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 GOLGB1Q14789 3259 aaKnown RBP12.15□□□□□ -0.46
ZNF540-210ENST00000592533 GOLGA8SH3BPF8 625 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 GOLGA8MH3BSY2 632 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 HARSP12081 509 aaKnown RBP12.15□□□□□ -0.46
ZNF540-210ENST00000592533 IBSPP21815 317 aaPredicted RBP12.15□□□□□ -0.46
ZNF540-210ENST00000592533 PCK1P35558 622 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 STAT5BP51692 787 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 NOL9Q5SY16 702 aaKnown RBP12.15□□□□□ -0.46
ZNF540-210ENST00000592533 FAM91A1Q658Y4 838 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 ZNF772Q68DY9 489 aaPredicted RBP12.15□□□□□ -0.46
ZNF540-210ENST00000592533 CAPN12Q6ZSI9 719 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 UNC45BQ8IWX7 931 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 MCRS1Q96EZ8 462 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 WRNIP1Q96S55 665 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 CYTH2Q99418 400 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 TUBB6Q9BUF5 446 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 SAE1Q9UBE0 346 aaPredicted RBP12.15□□□□□ -0.46
ZNF540-210ENST00000592533 ZFP69BQ9UJL9 534 aa12.15□□□□□ -0.46
ZNF540-210ENST00000592533 PRKCBP05771 671 aa12.15□□□□□ -0.47
ZNF540-210ENST00000592533 TGFB3P10600 412 aa12.15□□□□□ -0.47
ZNF540-210ENST00000592533 RAD23BP54727 409 aa12.15□□□□□ -0.47
ZNF540-210ENST00000592533 LAMTOR4Q0VGL1 99 aa12.15□□□□□ -0.47
ZNF540-210ENST00000592533 FSTL1Q12841 308 aa12.15□□□□□ -0.47
ZNF540-210ENST00000592533 KCNJ11Q14654 390 aa12.15□□□□□ -0.47
ZNF540-210ENST00000592533 TAF1BQ53T94 588 aaPredicted RBP12.15□□□□□ -0.47
ZNF540-210ENST00000592533 SH3D19Q5HYK7 790 aa12.15□□□□□ -0.47
ZNF540-210ENST00000592533 MPZL3Q6UWV2 235 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms