RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 TRNP1Q6NT89 227 aa16.56■□□□□ 0.24
MBD1-227ENST00000592060 IPO4Q8TEX9 1081 aaKnown RBP16.56■□□□□ 0.24
MBD1-227ENST00000592060 SELENOSQ9BQE4 189 aa16.56■□□□□ 0.24
MBD1-227ENST00000592060 PCDH9Q9HC56 1237 aa16.56■□□□□ 0.24
MBD1-227ENST00000592060 TSPAN16Q9UKR8 245 aa16.56■□□□□ 0.24
MBD1-227ENST00000592060 SMIM35A0A1B0GVV1 85 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 DYNC1LI2O43237 492 aaPredicted RBP16.55■□□□□ 0.24
MBD1-227ENST00000592060 MIPP30301 263 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 HIC1Q14526 733 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 GPR162Q16538 588 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 CCDC142Q17RM4 750 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 KCNT1Q5JUK3 1230 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 FAM102AQ5T9C2 384 aaPredicted RBP16.55■□□□□ 0.24
MBD1-227ENST00000592060 CATSPER4Q7RTX7 472 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 APBB1IPQ7Z5R6 666 aaPredicted RBP16.55■□□□□ 0.24
MBD1-227ENST00000592060 SPATS2Q86XZ4 545 aaKnown RBP16.55■□□□□ 0.24
MBD1-227ENST00000592060 CMASQ8NFW8 434 aaPredicted RBP16.55■□□□□ 0.24
MBD1-227ENST00000592060 FRMD8P1Q9BZ68 369 aaPredicted RBP16.55■□□□□ 0.24
MBD1-227ENST00000592060 TUBGCP4Q9UGJ1 667 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 NME7Q9Y5B8 376 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 NRCAMQ92823 1304 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 CEP350Q5VT06 3117 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 TRUB2O95900 331 aaKnown RBP16.55■□□□□ 0.24
MBD1-227ENST00000592060 ABHD2P08910 425 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 CD48P09326 243 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 DARSP14868 501 aaKnown RBP16.55■□□□□ 0.24
MBD1-227ENST00000592060 PCK1P35558 622 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 PSMC4P43686 418 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 ZNF143P52747 638 aaPredicted RBP16.55■□□□□ 0.24
MBD1-227ENST00000592060 CDC42EP1Q00587 391 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 OTUD4Q01804 1114 aaKnown RBP16.55■□□□□ 0.24
MBD1-227ENST00000592060 MYO1EQ12965 1108 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 STILQ15468 1287 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 GOLGA7BQ2TAP0 167 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 PKDCCQ504Y2 493 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 PRAMEF19Q5SWL8 479 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 CEP128Q6ZU80 1094 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 FAM183BPQ6ZVS7 135 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 CYP4V2Q6ZWL3 525 aaPredicted RBP16.55■□□□□ 0.24
MBD1-227ENST00000592060 EXOC3L1Q86VI1 746 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 C2orf69Q8N8R5 385 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 ACTL9Q8TC94 416 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 PPP1R13LQ8WUF5 828 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 PEBP4Q96S96 227 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 OSMRQ99650 979 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 MRPL45Q9BRJ2 306 aaKnown RBP16.55■□□□□ 0.24
MBD1-227ENST00000592060 FAM107BQ9H098 131 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 GGA2Q9UJY4 613 aa16.55■□□□□ 0.24
MBD1-227ENST00000592060 TPX2Q9ULW0 747 aaKnown RBP16.55■□□□□ 0.24
MBD1-227ENST00000592060 C2CD4BA6NLJ0 364 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 ANKRD65E5RJM6 399 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 E5RJQ4 531 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 TRIM66O15016 1216 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 CST8O60676 142 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 CELF2O95319 508 aaKnown RBP16.54■□□□□ 0.24
MBD1-227ENST00000592060 GPD1P21695 349 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 ADAM17P78536 824 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 GPS1Q13098 491 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 MORF4L2Q15014 288 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 PCBP1Q15365 356 aaKnown RBP eCLIP16.54■□□□□ 0.24
MBD1-227ENST00000592060 TAF5Q15542 800 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 QPCTQ16769 361 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 RNASEH2BQ5TBB1 312 aaKnown RBP16.54■□□□□ 0.24
MBD1-227ENST00000592060 NOTUMQ6P988 496 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 ALKAL1Q6UXT8 129 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 LRRC52Q8N7C0 313 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 C12orf29Q8N999 325 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 TTC13Q8NBP0 860 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 PIWIL1Q96J94 861 aaKnown RBP16.54■□□□□ 0.24
MBD1-227ENST00000592060 RBM15Q96T37 977 aaKnown RBP eCLIP16.54■□□□□ 0.24
MBD1-227ENST00000592060 TMEM121Q9BTD3 319 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 ASNSD1Q9NWL6 643 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 SLC5A4Q9NY91 659 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 FLRT1Q9NZU1 646 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 CNTN3Q9P232 1028 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 PCSK1NQ9UHG2 260 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 LGALS13Q9UHV8 139 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 USP18Q9UMW8 372 aa16.54■□□□□ 0.24
MBD1-227ENST00000592060 ZNF865P0CJ78 1059 aaPredicted RBP16.53■□□□□ 0.24
MBD1-227ENST00000592060 CYP2C9P11712 490 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 DRD4P21917 467 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 MAGEA4P43358 317 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 MAP2K5Q13163 448 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 CCDC38Q502W7 563 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 OLFML2BQ68BL8 750 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 TAOK1Q7L7X3 1001 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 DPH6Q7L8W6 267 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 C9orf72Q96LT7 481 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 CNPY3Q9BT09 278 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 CCDC134Q9H6E4 229 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 EURLQ9NYK6 297 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 CTNNAL1Q9UBT7 734 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 CPA4Q9UI42 421 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 GJD2Q9UKL4 321 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 GINS2Q9Y248 185 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 TRIP12Q14669 1992 aaPredicted RBP16.53■□□□□ 0.24
MBD1-227ENST00000592060 HAS3O00219 553 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 RNF8O76064 485 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 ENDOD1O94919 500 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 PECAM1P16284 738 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms