RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 KRT82Q9NSB4 513 aa20.31■□□□□ 0.84
DDX39A-214ENST00000590556 CEP72Q9P209 647 aa20.31■□□□□ 0.84
DDX39A-214ENST00000590556 USP15Q9Y4E8 981 aaPredicted RBP20.31■□□□□ 0.84
DDX39A-214ENST00000590556 MYH10P35580 1976 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 TRIM66O15016 1216 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 CYP26A1O43174 497 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 CALCAP01258 141 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 FAM200BP0CF97 657 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 PNMA6AP0CW24 399 aaPredicted RBP20.3■□□□□ 0.84
DDX39A-214ENST00000590556 ATF6P18850 670 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 ANXA13P27216 316 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 SDHAF4Q5VUM1 108 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 CACNA2D4Q7Z3S7 1137 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 ITIH5Q86UX2 942 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 FAM71AQ8IYT1 594 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 GPR152Q8TDT2 470 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 GIPC2Q8TF65 315 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 SPAG5Q96R06 1193 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 GPR88Q9GZN0 384 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 ASB3Q9Y575 518 aa20.3■□□□□ 0.84
DDX39A-214ENST00000590556 EYSQ5T1H1 3165 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 GRXCR2A6NFK2 248 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 F8VP50 259 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 F8VZ95 297 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 MBTPS2O43462 519 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 PTPN2P17706 415 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 BRD2P25440 801 aaKnown RBP20.29■□□□□ 0.84
DDX39A-214ENST00000590556 PBX1P40424 430 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 MTHFRP42898 656 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 CACNA2D1P54289 1103 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 TAF12Q16514 161 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 AAK1Q2M2I8 961 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 GOLGA7BQ2TAP0 167 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 PUS10Q3MIT2 529 aaKnown RBP20.29■□□□□ 0.84
DDX39A-214ENST00000590556 GRASPQ7Z6J2 395 aaPredicted RBP20.29■□□□□ 0.84
DDX39A-214ENST00000590556 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.29■□□□□ 0.84
DDX39A-214ENST00000590556 TFAP2BQ92481 460 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 C8orf48Q96LL4 319 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 DMAP1Q9NPF5 467 aaPredicted RBP20.29■□□□□ 0.84
DDX39A-214ENST00000590556 TMEM30AQ9NV96 361 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 CDH22Q9UJ99 828 aa20.29■□□□□ 0.84
DDX39A-214ENST00000590556 C2orf16Q68DN1 1984 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 O00370 1275 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 GNA15P30679 374 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 JAM2P57087 298 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 BPIFB4P59827 614 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 PTK2Q05397 1052 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 STILQ15468 1287 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 CNGA2Q16280 664 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 PTCRAQ6ISU1 281 aaPredicted RBP20.28■□□□□ 0.84
DDX39A-214ENST00000590556 SARM1Q6SZW1 724 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 DNAJB7Q7Z6W7 309 aaPredicted RBP20.28■□□□□ 0.84
DDX39A-214ENST00000590556 ANKRD52Q8NB46 1076 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 PSMG2Q969U7 264 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 SPATA17Q96L03 361 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 CEP295NLQ96MC4 621 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 NECTIN4Q96NY8 510 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 KCNK16Q96T55 309 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 SMOQ99835 787 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 CORO1BQ9BR76 489 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 DUSP16Q9BY84 665 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 TRIM5Q9C035 493 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 HCFC1R1Q9NWW0 138 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 DNMT3BQ9UBC3 853 aaKnown RBP20.28■□□□□ 0.84
DDX39A-214ENST00000590556 HESX1Q9UBX0 185 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 TSPAN16Q9UKR8 245 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 FAM50BQ9Y247 325 aa20.28■□□□□ 0.84
DDX39A-214ENST00000590556 DOCK6Q96HP0 2047 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 PRUNE2Q8WUY3 3088 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 SLC38A8A6NNN8 435 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 THAP12O43422 761 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 MED7O43513 233 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 CSH1P0DML2 217 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 CSH2P0DML3 217 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 NPR3P17342 541 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 CLCN1P35523 988 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 SOX5P35711 763 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 STAT1P42224 750 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 MAP3K7CLP57077 242 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 CBX2Q14781 532 aaPredicted RBP20.27■□□□□ 0.84
DDX39A-214ENST00000590556 LCLAT1Q6UWP7 414 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 SUSD6Q92537 303 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 ZSWIM1Q9BR11 485 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 NUP58Q9BVL2 599 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 CSNK1G1Q9HCP0 422 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 ACP6Q9NPH0 428 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 ASAH2Q9NR71 780 aa20.27■□□□□ 0.84
DDX39A-214ENST00000590556 AP5Z1O43299 807 aa20.26■□□□□ 0.83
DDX39A-214ENST00000590556 BEST1O76090 585 aa20.26■□□□□ 0.83
DDX39A-214ENST00000590556 GFPT2O94808 682 aa20.26■□□□□ 0.83
DDX39A-214ENST00000590556 SLC8A3P57103 927 aa20.26■□□□□ 0.83
DDX39A-214ENST00000590556 NTHL1P78549 312 aa20.26■□□□□ 0.83
DDX39A-214ENST00000590556 MRPS5P82675 430 aaKnown RBP20.26■□□□□ 0.83
DDX39A-214ENST00000590556 MTMR3Q13615 1198 aa20.26■□□□□ 0.83
DDX39A-214ENST00000590556 PABPC1LQ4VXU2 614 aaKnown RBP20.26■□□□□ 0.83
DDX39A-214ENST00000590556 CYP4A22Q5TCH4 519 aa20.26■□□□□ 0.83
DDX39A-214ENST00000590556 CLEC20AQ6ZU45 233 aa20.26■□□□□ 0.83
DDX39A-214ENST00000590556 SLC47A2Q86VL8 602 aa20.26■□□□□ 0.83
DDX39A-214ENST00000590556 HS6ST3Q8IZP7 471 aa20.26■□□□□ 0.83
DDX39A-214ENST00000590556 STKLD1Q8NE28 680 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms