RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ZC2HC1CQ53FD0 456 aaPredicted RBP18.63■□□□□ 0.57
RETREG3-210ENST00000590541 TMEM92Q6UXU6 159 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 PIP4P1Q86T03 277 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 CCDC33Q8N5R6 958 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 ARL14EPQ8N8R7 260 aaPredicted RBP18.63■□□□□ 0.57
RETREG3-210ENST00000590541 SH3RF2Q8TEC5 729 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 LEO1Q8WVC0 666 aaPredicted RBP18.63■□□□□ 0.57
RETREG3-210ENST00000590541 RLN3Q8WXF3 142 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 CALML4Q96GE6 196 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 FNBP1Q96RU3 617 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 REEP2Q9BRK0 252 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 NUSAP1Q9BXS6 441 aaKnown RBP18.63■□□□□ 0.57
RETREG3-210ENST00000590541 ODF2LQ9ULJ1 636 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 TNRC6BQ9UPQ9 1833 aaKnown RBP18.63■□□□□ 0.57
RETREG3-210ENST00000590541 TRAV19A0A0A6YYK7 116 aa18.62■□□□□ 0.57
RETREG3-210ENST00000590541 C2orf78A6NCI8 922 aa18.62■□□□□ 0.57
RETREG3-210ENST00000590541 ANKRD63C9JTQ0 380 aa18.62■□□□□ 0.57
RETREG3-210ENST00000590541 K7ENM7 598 aa18.62■□□□□ 0.57
RETREG3-210ENST00000590541 TNFRSF10BO14763 440 aa18.62■□□□□ 0.57
RETREG3-210ENST00000590541 TCF3P15923 654 aa18.62■□□□□ 0.57
RETREG3-210ENST00000590541 ENGP17813 658 aa18.62■□□□□ 0.57
RETREG3-210ENST00000590541 SCP2P22307 547 aa18.62■□□□□ 0.57
RETREG3-210ENST00000590541 CYP2F1P24903 491 aa18.62■□□□□ 0.57
RETREG3-210ENST00000590541 P2RY2P41231 377 aa18.62■□□□□ 0.57
RETREG3-210ENST00000590541 MAPK8P45983 427 aa18.62■□□□□ 0.57
RETREG3-210ENST00000590541 TSPY1Q01534 308 aa18.62■□□□□ 0.57
RETREG3-210ENST00000590541 NFE2Q16621 373 aaPredicted RBP18.62■□□□□ 0.57
RETREG3-210ENST00000590541 FRMD1Q8N878 549 aa18.62■□□□□ 0.57
RETREG3-210ENST00000590541 LRRC15Q8TF66 581 aa18.62■□□□□ 0.57
RETREG3-210ENST00000590541 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 VPS37CA5D8V6 355 aaPredicted RBP18.61■□□□□ 0.57
RETREG3-210ENST00000590541 TISP43B9A030 160 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 CAPNS1P04632 268 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 CHRM1P11229 460 aaPredicted RBP18.61■□□□□ 0.57
RETREG3-210ENST00000590541 PTGER3P43115 390 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 RPL10AP62906 217 aaKnown RBP18.61■□□□□ 0.57
RETREG3-210ENST00000590541 SIM1P81133 766 aaPredicted RBP18.61■□□□□ 0.57
RETREG3-210ENST00000590541 ZXDBP98169 803 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 SEMA3BQ13214 749 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 TMEM119Q4V9L6 283 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 ARMCX6Q7L4S7 300 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 LPCAT2Q7L5N7 544 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 TTC30AQ86WT1 665 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 SYT12Q8IV01 421 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 TMEFF1Q8IYR6 380 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 MYCT1Q8N699 235 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 FIZ1Q96SL8 496 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 PKMYT1Q99640 499 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 ABCB6Q9NP58 842 aa18.61■□□□□ 0.57
RETREG3-210ENST00000590541 MBD1Q9UIS9 605 aaPredicted RBP18.61■□□□□ 0.57
RETREG3-210ENST00000590541 FAM221BA6H8Z2 402 aa18.6■□□□□ 0.57
RETREG3-210ENST00000590541 UPK3BL1B0FP48 263 aa18.6■□□□□ 0.57
RETREG3-210ENST00000590541 UPK3BL2E5RIL1 263 aa18.6■□□□□ 0.57
RETREG3-210ENST00000590541 NFATC1O95644 943 aa18.6■□□□□ 0.57
RETREG3-210ENST00000590541 ZNF131P52739 623 aa18.6■□□□□ 0.57
RETREG3-210ENST00000590541 SF3A1Q15459 793 aaKnown RBP18.6■□□□□ 0.57
RETREG3-210ENST00000590541 CCDC142Q17RM4 750 aa18.6■□□□□ 0.57
RETREG3-210ENST00000590541 SV2CQ496J9 727 aa18.6■□□□□ 0.57
RETREG3-210ENST00000590541 SLC23A3Q6PIS1 610 aa18.6■□□□□ 0.57
RETREG3-210ENST00000590541 SFTPA1Q8IWL2 248 aa18.6■□□□□ 0.57
RETREG3-210ENST00000590541 PDCL2Q8N4E4 241 aa18.6■□□□□ 0.57
RETREG3-210ENST00000590541 ACBD6Q9BR61 282 aa18.6■□□□□ 0.57
RETREG3-210ENST00000590541 ARHGAP26Q9UNA1 814 aa18.6■□□□□ 0.57
RETREG3-210ENST00000590541 ANAPC1Q9H1A4 1944 aa18.6■□□□□ 0.57
RETREG3-210ENST00000590541 PCNX2A6NKB5 2137 aa18.59■□□□□ 0.57
RETREG3-210ENST00000590541 ATXN2Q99700 1313 aaKnown RBP18.59■□□□□ 0.57
RETREG3-210ENST00000590541 K7ELQ4 463 aaPredicted RBP18.59■□□□□ 0.57
RETREG3-210ENST00000590541 TRAK2O60296 914 aa18.59■□□□□ 0.57
RETREG3-210ENST00000590541 ALDH1A2O94788 518 aa18.59■□□□□ 0.57
RETREG3-210ENST00000590541 ACAT1P24752 427 aaKnown RBP18.59■□□□□ 0.57
RETREG3-210ENST00000590541 FAM193AP78312 1265 aa18.59■□□□□ 0.57
RETREG3-210ENST00000590541 MRPS21P82921 87 aaKnown RBP18.59■□□□□ 0.57
RETREG3-210ENST00000590541 GTF2BQ00403 316 aa18.59■□□□□ 0.57
RETREG3-210ENST00000590541 MESP2Q0VG99 397 aa18.59■□□□□ 0.57
RETREG3-210ENST00000590541 INTS6LQ5JSJ4 861 aaKnown RBP18.59■□□□□ 0.57
RETREG3-210ENST00000590541 ADALQ6DHV7 355 aa18.59■□□□□ 0.57
RETREG3-210ENST00000590541 CRELD2Q6UXH1 353 aaPredicted RBP18.59■□□□□ 0.57
RETREG3-210ENST00000590541 PROSER1Q86XN7 944 aa18.59■□□□□ 0.57
RETREG3-210ENST00000590541 ALLCQ8N6M5 410 aa18.59■□□□□ 0.57
RETREG3-210ENST00000590541 IL17RCQ8NAC3 791 aa18.59■□□□□ 0.57
RETREG3-210ENST00000590541 TXNDC5Q8NBS9 432 aaKnown RBP18.59■□□□□ 0.57
RETREG3-210ENST00000590541 PARVGQ9HBI0 331 aa18.59■□□□□ 0.57
RETREG3-210ENST00000590541 FSCN3Q9NQT6 498 aa18.59■□□□□ 0.57
RETREG3-210ENST00000590541 DDX43Q9NXZ2 648 aaKnown RBP18.59■□□□□ 0.57
RETREG3-210ENST00000590541 GTF3C4Q9UKN8 822 aa18.59■□□□□ 0.57
RETREG3-210ENST00000590541 L1RE1Q9UN81 338 aa18.59■□□□□ 0.57
RETREG3-210ENST00000590541 STYXL1Q9Y6J8 313 aa18.59■□□□□ 0.57
RETREG3-210ENST00000590541 DSPP15924 2871 aaKnown RBP18.59■□□□□ 0.57
RETREG3-210ENST00000590541 SGK1O00141 431 aa18.58■□□□□ 0.56
RETREG3-210ENST00000590541 MAP3K13O43283 966 aa18.58■□□□□ 0.56
RETREG3-210ENST00000590541 FAM13AO94988 1023 aa18.58■□□□□ 0.56
RETREG3-210ENST00000590541 PDIA4P13667 645 aaKnown RBP18.58■□□□□ 0.56
RETREG3-210ENST00000590541 HDCP19113 662 aa18.58■□□□□ 0.56
RETREG3-210ENST00000590541 SYT1P21579 422 aa18.58■□□□□ 0.56
RETREG3-210ENST00000590541 ABCD1P33897 745 aa18.58■□□□□ 0.56
RETREG3-210ENST00000590541 KCNB1Q14721 858 aa18.58■□□□□ 0.56
RETREG3-210ENST00000590541 MAP7D1Q3KQU3 841 aa18.58■□□□□ 0.56
RETREG3-210ENST00000590541 PEAR1Q5VY43 1037 aaPredicted RBP18.58■□□□□ 0.56
RETREG3-210ENST00000590541 GPBP1Q86WP2 473 aa18.58■□□□□ 0.56
RETREG3-210ENST00000590541 CHCHD4Q8N4Q1 142 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms