RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.97□□□□□ -0.33
PDE4A-207ENST00000590407 TCP10LQ8TDR4 215 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 SLC44A1Q8WWI5 657 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 RSAD2Q8WXG1 361 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 SKA1Q96BD8 255 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 AGTPBP1Q9UPW5 1226 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 TELO2Q9Y4R8 837 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 OGTO15294 1046 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 MED7O43513 233 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 CST8O60676 142 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 LRCH4O75427 683 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 CBX6O95503 412 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 CST3P01034 146 aaPredicted RBP12.97□□□□□ -0.33
PDE4A-207ENST00000590407 EDN1P05305 212 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 PAX7P23759 505 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 SSTR1P30872 391 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 STIP1P31948 543 aaKnown RBP12.97□□□□□ -0.33
PDE4A-207ENST00000590407 SSTR3P32745 418 aaPredicted RBP12.97□□□□□ -0.33
PDE4A-207ENST00000590407 RAD23BP54727 409 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 ZNF280AP59817 542 aaPredicted RBP12.97□□□□□ -0.33
PDE4A-207ENST00000590407 MTDHQ86UE4 582 aaKnown RBP12.97□□□□□ -0.33
PDE4A-207ENST00000590407 PALM2Q8IXS6 379 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 ARFGAP1Q8N6T3 406 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 FBXO36Q8NEA4 188 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 DNERQ8NFT8 737 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 TFAP2BQ92481 460 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 APOPT1Q96IL0 206 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 BTBD10Q9BSF8 475 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 MRPL4Q9BYD3 311 aaKnown RBP12.97□□□□□ -0.33
PDE4A-207ENST00000590407 DENND2DQ9H6A0 471 aaPredicted RBP12.97□□□□□ -0.33
PDE4A-207ENST00000590407 ACAD9Q9H845 621 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 AS3MTQ9HBK9 375 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 NPHS2Q9NP85 383 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 MYOZ2Q9NPC6 264 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 CNTN3Q9P232 1028 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 COL11A1P12107 1806 aaPredicted RBP12.96□□□□□ -0.33
PDE4A-207ENST00000590407 HGSO14964 777 aaPredicted RBP12.96□□□□□ -0.34
PDE4A-207ENST00000590407 TMEM63AO94886 807 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 ENDOD1O94919 500 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 HAUS5O94927 633 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 MT-ND3P03897 115 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 ATP5BP06576 529 aaKnown RBP12.96□□□□□ -0.34
PDE4A-207ENST00000590407 KRT3P12035 628 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 RFC1P35251 1148 aaPredicted RBP12.96□□□□□ -0.34
PDE4A-207ENST00000590407 ABL2P42684 1182 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 GDF10P55107 478 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 MYL6P60660 151 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 MRPS35P82673 323 aaKnown RBP12.96□□□□□ -0.34
PDE4A-207ENST00000590407 CDK16Q00536 496 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 DGKZQ13574 1117 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 CAPSQ13938 189 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 PRKD1Q15139 912 aaPredicted RBP12.96□□□□□ -0.34
PDE4A-207ENST00000590407 TSNAXIP1Q2TAA8 658 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 PTPN20Q4JDL3 420 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 HP1BP3Q5SSJ5 553 aaPredicted RBP12.96□□□□□ -0.34
PDE4A-207ENST00000590407 CAPRIN2Q6IMN6 1127 aaKnown RBP12.96□□□□□ -0.34
PDE4A-207ENST00000590407 ZNF449Q6P9G9 518 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 LMNTD2Q8IXW0 634 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 HAUS1Q96CS2 278 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 NSL1Q96IY1 281 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 WNK4Q96J92 1243 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 MIPEPQ99797 713 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 TSSK1BQ9BXA7 367 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 TEX13BQ9BXU2 312 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 XYLT2Q9H1B5 865 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 ZNF277Q9NRM2 450 aaPredicted RBP12.96□□□□□ -0.34
PDE4A-207ENST00000590407 NRBP2Q9NSY0 501 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 MKS1Q9NXB0 559 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 STOML1Q9UBI4 398 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 ZNF112Q9UJU3 913 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 ZNF180Q9UJW8 692 aa12.96□□□□□ -0.34
PDE4A-207ENST00000590407 MCF2LO15068 1137 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 CHADO15335 359 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 GAS2O43903 313 aaKnown RBP12.95□□□□□ -0.34
PDE4A-207ENST00000590407 B4GALT4O60513 344 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 MSCO60682 206 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 MAFO75444 373 aaPredicted RBP12.95□□□□□ -0.34
PDE4A-207ENST00000590407 CHRM1P11229 460 aaPredicted RBP12.95□□□□□ -0.34
PDE4A-207ENST00000590407 IL1R2P27930 398 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 PCK1P35558 622 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 ASPAP45381 313 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 GABRB2P47870 512 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 IRX1P78414 480 aaPredicted RBP12.95□□□□□ -0.34
PDE4A-207ENST00000590407 CXCL9Q07325 125 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 GRIK3Q13003 919 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 LBRQ14739 615 aaKnown RBP12.95□□□□□ -0.34
PDE4A-207ENST00000590407 EFTUD2Q15029 972 aaKnown RBP eCLIP12.95□□□□□ -0.344e-7■■■■■ 27
PDE4A-207ENST00000590407 CAPN12Q6ZSI9 719 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 PAXIP1Q6ZW49 1069 aaPredicted RBP12.95□□□□□ -0.34
PDE4A-207ENST00000590407 TRIM42Q8IWZ5 723 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 SLC4A11Q8NBS3 891 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 CADM1Q9BY67 442 aaKnown RBP12.95□□□□□ -0.34
PDE4A-207ENST00000590407 MTMR12Q9C0I1 747 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 RSAD1Q9HA92 442 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 ZFATQ9P243 1243 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 XPO7Q9UIA9 1087 aaKnown RBP12.95□□□□□ -0.34
PDE4A-207ENST00000590407 CPSF3Q9UKF6 684 aaKnown RBP12.95□□□□□ -0.34
PDE4A-207ENST00000590407 TEX264Q9Y6I9 313 aa12.95□□□□□ -0.34
PDE4A-207ENST00000590407 C19orf81C9J6K1 198 aa12.94□□□□□ -0.34
PDE4A-207ENST00000590407 GOLGA8SH3BPF8 625 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms