RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 NR3C1P04150 777 aa18■□□□□ 0.47
CROCCP3-203ENST00000589964 RPN1P04843 607 aaKnown RBP18■□□□□ 0.47
CROCCP3-203ENST00000589964 CSH1P0DML2 217 aa18■□□□□ 0.47
CROCCP3-203ENST00000589964 CSH2P0DML3 217 aa18■□□□□ 0.47
CROCCP3-203ENST00000589964 LHX1P48742 406 aa18■□□□□ 0.47
CROCCP3-203ENST00000589964 CYP27A1Q02318 531 aa18■□□□□ 0.47
CROCCP3-203ENST00000589964 DPYDQ12882 1025 aa18■□□□□ 0.47
CROCCP3-203ENST00000589964 SRSF5Q13243 272 aaKnown RBP18■□□□□ 0.47
CROCCP3-203ENST00000589964 SURF1Q15526 300 aa18■□□□□ 0.47
CROCCP3-203ENST00000589964 SPOPLQ6IQ16 392 aa18■□□□□ 0.47
CROCCP3-203ENST00000589964 MON1AQ86VX9 555 aa18■□□□□ 0.47
CROCCP3-203ENST00000589964 SMYD4Q8IYR2 804 aaPredicted RBP18■□□□□ 0.47
CROCCP3-203ENST00000589964 ARL14EPQ8N8R7 260 aaPredicted RBP18■□□□□ 0.47
CROCCP3-203ENST00000589964 EEF2KMTQ96G04 330 aa18■□□□□ 0.47
CROCCP3-203ENST00000589964 MYRFLQ96LU7 910 aa18■□□□□ 0.47
CROCCP3-203ENST00000589964 FNBP1Q96RU3 617 aa18■□□□□ 0.47
CROCCP3-203ENST00000589964 GCNT4Q9P109 453 aa18■□□□□ 0.47
CROCCP3-203ENST00000589964 CDH9Q9ULB4 789 aa18■□□□□ 0.47
CROCCP3-203ENST00000589964 F8VP50 259 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 DPYSL4O14531 572 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 FGF19O95750 216 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 LMNAP02545 664 aaKnown RBP17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 TRIM49P0CI25 452 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 TRIM49CP0CI26 452 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 WEE1P30291 646 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 MAGEA11P43364 429 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 SYKP43405 635 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 PGFP49763 221 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 RPL10AP62906 217 aaKnown RBP17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 KRT85P78386 507 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 PAQR9Q6ZVX9 377 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 CELF5Q8N6W0 485 aaKnown RBP17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 ZBTB44Q8NCP5 570 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 OR6B3Q8NGW1 331 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 CSGALNACT1Q8TDX6 532 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 EZH1Q92800 747 aaPredicted RBP17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 ERCC4Q92889 916 aaPredicted RBP17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 TRMT2BQ96GJ1 504 aaKnown RBP17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 GCNAQ96QF7 691 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 OBP2AQ9NY56 170 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 FBXO4Q9UKT5 387 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 WNT6Q9Y6F9 365 aa17.99■□□□□ 0.47
CROCCP3-203ENST00000589964 MAN2B1O00754 1011 aa17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 PTPN1P18031 435 aaKnown RBP17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 GNL1P36915 607 aaPredicted RBP17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 CLDN10P78369 228 aa17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 ARHGAP29Q52LW3 1261 aa17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 FSTL4Q6MZW2 842 aa17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 DPH6Q7L8W6 267 aa17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 MYCBPAPQ8TBZ2 947 aa17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 SPATA18Q8TC71 538 aa17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 E2F7Q96AV8 911 aa17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 NELL2Q99435 816 aa17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 TDP1Q9NUW8 608 aa17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 MAGEC2Q9UBF1 373 aaPredicted RBP17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 MRPS17Q9Y2R5 130 aaKnown RBP17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 ZNF638Q14966 1978 aaKnown RBP17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 ATG2BQ96BY7 2078 aa17.98■□□□□ 0.47
CROCCP3-203ENST00000589964 K7ESF4 209 aa17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 LILRB5O75023 590 aa17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 TACC1O75410 805 aa17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 USP4Q13107 963 aa17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 BIRC3Q13489 604 aa17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 NCOA4Q13772 614 aa17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 CCINQ13939 588 aa17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 ZNF77Q15935 545 aa17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 LPAL2Q16609 132 aa17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 KRBA2Q6ZNG9 492 aa17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 SLC9A9Q8IVB4 645 aa17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 KIAA2013Q8IYS2 634 aa17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 MRPS31Q92665 395 aaKnown RBP17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 FUBP3Q96I24 572 aaKnown RBP eCLIP17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 LINC00597Q9H2U6 94 aa17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 SNX25Q9H3E2 840 aa17.97■□□□□ 0.47
CROCCP3-203ENST00000589964 PHACTR2O75167 634 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 AKAP3O75969 853 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 PDIA4P13667 645 aaKnown RBP17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 AVPR1AP37288 418 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 GRIK1P39086 918 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 SNRPFP62306 86 aaKnown RBP17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 TNNC1P63316 161 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 PPP3CAQ08209 521 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 MESP2Q0VG99 397 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 TRPC3Q13507 836 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 ZNF699Q32M78 642 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 ITPRIPL2Q3MIP1 535 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 ZNF528Q3MIS6 628 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 CEP135Q66GS9 1140 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 SFTPA1Q8IWL2 248 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 B3GALNT2Q8NCR0 500 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 SH3RF2Q8TEC5 729 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 WBP2Q969T9 261 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 TWNKQ96RR1 684 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 KCNK16Q96T55 309 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 RNF38Q9H0F5 515 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 APOBEC3GQ9HC16 384 aaKnown RBP17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 ZSCAN32Q9NX65 697 aa17.96■□□□□ 0.47
CROCCP3-203ENST00000589964 A0A1W2PQ27 194 aa17.95■□□□□ 0.46
CROCCP3-203ENST00000589964 A0A1W2PQ64 194 aa17.95■□□□□ 0.46
CROCCP3-203ENST00000589964 A0A1W2PQD8 194 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms