RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 ZNHIT6Q9NWK9 470 aaKnown RBP14.44□□□□□ -0.1
VMP1-210ENST00000589823 AIPL1Q9NZN9 384 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 TSPAN16Q9UKR8 245 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.44□□□□□ -0.1
VMP1-210ENST00000589823 TRANK1O15050 2925 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 M0QYV0 167 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 TRIM66O15016 1216 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 MICAL2O94851 1124 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 LRG1P02750 347 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 ANXA13P27216 316 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 GRIK1P39086 918 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 BCAT1P54687 386 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 PLD1Q13393 1074 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 EP400NLQ6ZTU2 488 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 PAQR9Q6ZVX9 377 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 ZNF677Q86XU0 584 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 TTC9BQ8N6N2 239 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 ANKRD52Q8NB46 1076 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 SPC24Q8NBT2 197 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 RHOBTB2Q9BYZ6 727 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 CRISPLD1Q9H336 500 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 DMAP1Q9NPF5 467 aaPredicted RBP14.43□□□□□ -0.1
VMP1-210ENST00000589823 IMPACTQ9P2X3 320 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 YIPF1Q9Y548 306 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 CEP83Q9Y592 693 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 INSL5Q9Y5Q6 135 aa14.43□□□□□ -0.1
VMP1-210ENST00000589823 MYO7AQ13402 2215 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 LINC01565O15544 149 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 ZMYND10O75800 440 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 SOAT2O75908 522 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 NPR3P17342 541 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 SSTR3P32745 418 aaPredicted RBP14.42□□□□□ -0.1
VMP1-210ENST00000589823 EPHB3P54753 998 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 ADKP55263 362 aaKnown RBP14.42□□□□□ -0.1
VMP1-210ENST00000589823 MAP3K7CLP57077 242 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 KLHL30Q0D2K2 578 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 BST2Q10589 180 aaKnown RBP14.42□□□□□ -0.1
VMP1-210ENST00000589823 TWF1Q12792 350 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 ADAM15Q13444 863 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 KCNC3Q14003 757 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 VEPH1Q14D04 833 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 CCDC85BQ15834 202 aaPredicted RBP14.42□□□□□ -0.1
VMP1-210ENST00000589823 MEA1Q16626 185 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 DDR2Q16832 855 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 TAF3Q5VWG9 929 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 TMEM184AQ6ZMB5 413 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 IRF2BP2Q7Z5L9 587 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 NOP9Q86U38 636 aaKnown RBP14.42□□□□□ -0.1
VMP1-210ENST00000589823 ELMOD1Q8N336 334 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 VN1R2Q8NFZ6 395 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 UBA3Q8TBC4 463 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 C8orf48Q96LL4 319 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 ZSWIM1Q9BR11 485 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 DUSP16Q9BY84 665 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 SFXN1Q9H9B4 322 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 ABHD10Q9NUJ1 306 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 ZDHHC7Q9NXF8 308 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 CLDND1Q9NY35 253 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 PCDHGC3Q9UN70 934 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 BZW2Q9Y6E2 419 aaKnown RBP14.42□□□□□ -0.1
VMP1-210ENST00000589823 PLXNA3P51805 1871 aa14.42□□□□□ -0.1
VMP1-210ENST00000589823 F8VP50 259 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 XYLBO75191 536 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 GLP2RO95838 553 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 SERPING1P05155 500 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 HNRNPA1P09651 372 aaKnown RBP eCLIP14.41□□□□□ -0.1
VMP1-210ENST00000589823 SETSIPP0DME0 302 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 HOXA9P31269 272 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 PRKCIP41743 596 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 RBM10P98175 930 aaKnown RBP14.41□□□□□ -0.1
VMP1-210ENST00000589823 CDR2Q01850 454 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 SKIV2LQ15477 1246 aaKnown RBP14.41□□□□□ -0.1
VMP1-210ENST00000589823 TDRD12Q587J7 1177 aaKnown RBP14.41□□□□□ -0.1
VMP1-210ENST00000589823 E4F1Q66K89 784 aaPredicted RBP14.41□□□□□ -0.1
VMP1-210ENST00000589823 CLEC20AQ6ZU45 233 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 TTC30AQ86WT1 665 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 PPM1EQ8WY54 764 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 PABPC5Q96DU9 382 aaKnown RBP14.41□□□□□ -0.1
VMP1-210ENST00000589823 CEP295NLQ96MC4 621 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 DNAJC7Q99615 494 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 SMOQ99835 787 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 CSNK1G1Q9HCP0 422 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 NOCTQ9UK39 431 aaKnown RBP14.41□□□□□ -0.1
VMP1-210ENST00000589823 SZT2Q5T011 3432 aa14.41□□□□□ -0.1
VMP1-210ENST00000589823 PRRC2BQ5JSZ5 2229 aaKnown RBP14.41□□□□□ -0.1
VMP1-210ENST00000589823 XPO1O14980 1071 aaKnown RBP14.4□□□□□ -0.1
VMP1-210ENST00000589823 MMEP08473 750 aa14.4□□□□□ -0.1
VMP1-210ENST00000589823 SKILP12757 684 aa14.4□□□□□ -0.1
VMP1-210ENST00000589823 TNFAIP3P21580 790 aa14.4□□□□□ -0.1
VMP1-210ENST00000589823 HNRNPH3P31942 346 aaKnown RBP14.4□□□□□ -0.1
VMP1-210ENST00000589823 GPR15P49685 360 aa14.4□□□□□ -0.1
VMP1-210ENST00000589823 CACNA2D1P54289 1103 aa14.4□□□□□ -0.1
VMP1-210ENST00000589823 PDE4CQ08493 712 aa14.4□□□□□ -0.1
VMP1-210ENST00000589823 GOLGA8FQ08AF8 430 aa14.4□□□□□ -0.1
VMP1-210ENST00000589823 GOLGA8DPQ0D2H9 430 aa14.4□□□□□ -0.1
VMP1-210ENST00000589823 ARID5BQ14865 1188 aa14.4□□□□□ -0.1
VMP1-210ENST00000589823 TAF12Q16514 161 aa14.4□□□□□ -0.1
VMP1-210ENST00000589823 CTC1Q2NKJ3 1217 aa14.4□□□□□ -0.1
VMP1-210ENST00000589823 SDHAF4Q5VUM1 108 aa14.4□□□□□ -0.1
VMP1-210ENST00000589823 ANKRD54Q6NXT1 300 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms