RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 TXNDC9O14530 226 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 TPI1P60174 286 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 FBXO36Q8NEA4 188 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 JOSD2Q8TAC2 188 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 ZNF516Q92618 1163 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 TINF2Q9BSI4 451 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 CIB2O75838 187 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 EPHB2P29323 1055 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 JAM2P57087 298 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 NOMO3P69849 1222 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 FBXO47Q5MNV8 452 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 TMEM63BQ5T3F8 832 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 BTBD8Q5XKL5 378 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 LRRC57Q8N9N7 239 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 SMC1BQ8NDV3 1235 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 EXD1Q8NHP7 514 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 SLC2A14Q8TDB8 520 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 TTC25Q96NG3 672 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 GAD1Q99259 594 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 ABI2Q9NYB9 513 aaPredicted RBP15.23■□□□□ 0.03
RETREG3-208ENST00000589797 TTLL13PA6NNM8 815 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 DCDC2CA8MYV0 355 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 GPR25O00155 361 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 AP1G2O75843 785 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 KCNA3P22001 575 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 FECHP22830 423 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 TYK2P29597 1187 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 SLC26A2P50443 739 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 POU5F1BQ06416 359 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 C1QBPQ07021 282 aaKnown RBP15.23■□□□□ 0.03
RETREG3-208ENST00000589797 THEM5Q8N1Q8 247 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 RAET1EQ8TD07 263 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.23■□□□□ 0.03
RETREG3-208ENST00000589797 HAUS2Q9NVX0 235 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 UBQLN1Q9UMX0 589 aaKnown RBP15.23■□□□□ 0.03
RETREG3-208ENST00000589797 C17orf102A2RUQ5 167 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 PABPN1LA6NDY0 278 aaKnown RBP15.23■□□□□ 0.03
RETREG3-208ENST00000589797 RRN3P2A6NIE6 340 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 KCNK1O00180 336 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 C2CD2LO14523 706 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 PSTPIP1O43586 416 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 GRIN3BO60391 1043 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 CHKAP35790 457 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 RASSF2P50749 326 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 SNCBQ16143 134 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 OR6P1Q8NGX9 317 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 LRRC37BQ96QE4 947 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 CYTH2Q99418 400 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 DHX33Q9H6R0 707 aaKnown RBP15.23■□□□□ 0.03
RETREG3-208ENST00000589797 RBPJLQ9UBG7 517 aa15.23■□□□□ 0.03
RETREG3-208ENST00000589797 CPSF3Q9UKF6 684 aaKnown RBP15.23■□□□□ 0.03
RETREG3-208ENST00000589797 KNL1Q8NG31 2342 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 KRT38O76015 456 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 FAM107AO95990 144 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 CHRNB2P17787 502 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 PPM1FP49593 454 aaPredicted RBP15.22■□□□□ 0.03
RETREG3-208ENST00000589797 PCSK7Q16549 785 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 CCNG2Q16589 344 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 ZNF662Q6ZS27 426 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 MYLK4Q86YV6 388 aaPredicted RBP15.22■□□□□ 0.03
RETREG3-208ENST00000589797 KCNV2Q8TDN2 545 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 C18orf25Q96B23 403 aaPredicted RBP15.22■□□□□ 0.03
RETREG3-208ENST00000589797 PCMTD2Q9NV79 361 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 NAALADL1Q9UQQ1 740 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 RIPK2O43353 540 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 TTC4O95801 387 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 THOC5Q13769 683 aaKnown RBP15.22■□□□□ 0.03
RETREG3-208ENST00000589797 LVRNQ6Q4G3 990 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 TMEM130Q8N3G9 435 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 CCNYL1Q8N7R7 359 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 PPFIBP2Q8ND30 876 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 NDRG1Q92597 394 aaKnown RBP15.22■□□□□ 0.03
RETREG3-208ENST00000589797 ZFYVE28Q9HCC9 887 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 BARX2Q9UMQ3 279 aaPredicted RBP15.22■□□□□ 0.03
RETREG3-208ENST00000589797 FZD9O00144 591 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 DENND5BQ6ZUT9 1274 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 NUDCD3Q8IVD9 361 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 FSD1LQ9BXM9 530 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 PSD3Q9NYI0 1048 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 BFARQ9NZS9 450 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 ZFATQ9P243 1243 aa15.22■□□□□ 0.03
RETREG3-208ENST00000589797 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.21■□□□□ 0.03
RETREG3-208ENST00000589797 CCDC160A6NGH7 325 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 BTBD19C9JJ37 291 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 LCA5LO95447 670 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 ASS1P00966 412 aaKnown RBP15.21■□□□□ 0.03
RETREG3-208ENST00000589797 CD4P01730 458 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 ESRRAP11474 423 aaPredicted RBP15.21■□□□□ 0.03
RETREG3-208ENST00000589797 NOVP48745 357 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 CLNS1AP54105 237 aaKnown RBP15.21■□□□□ 0.03
RETREG3-208ENST00000589797 ZNF200P98182 395 aaPredicted RBP15.21■□□□□ 0.03
RETREG3-208ENST00000589797 PTK7Q13308 1070 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 PPIL2Q13356 520 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 CES3Q6UWW8 571 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 MIB1Q86YT6 1006 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 PDCD7Q8N8D1 485 aaKnown RBP15.21■□□□□ 0.03
RETREG3-208ENST00000589797 RUBCNQ92622 972 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 LPPQ93052 612 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 PABPC5Q96DU9 382 aaKnown RBP15.21■□□□□ 0.03
RETREG3-208ENST00000589797 ZMYM2Q9UBW7 1377 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms