RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 KIFC3Q9BVG8 833 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 ZDHHC5Q9C0B5 715 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 CDT1Q9H211 546 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 SLKQ9H2G2 1235 aaPredicted RBP6.62□□□□□ -1.35
VPS25-204ENST00000589577 GAREM1Q9H706 876 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 CPNE5Q9HCH3 593 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 SLC38A7Q9NVC3 462 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 GMIPQ9P107 970 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 CNTN3Q9P232 1028 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 HSFX1Q9UBD0 423 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 TUBGCP4Q9UGJ1 667 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 HCN2Q9UL51 889 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.62□□□□□ -1.35
VPS25-204ENST00000589577 SCN1AP35498 2009 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 SPTBN1Q01082 2364 aaKnown RBP6.61□□□□□ -1.35
VPS25-204ENST00000589577 KLF18A0A0U1RQI7 1052 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 A0A1W2PQF6 199 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 OR6C75A6NL08 312 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 ABLIM1O14639 778 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 PRPF3O43395 683 aaKnown RBP6.61□□□□□ -1.35
VPS25-204ENST00000589577 TNFSF14O43557 240 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 CDKL5O76039 1030 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 LIG1P18858 919 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 DDX6P26196 483 aaKnown RBP eCLIP6.61□□□□□ -1.35
VPS25-204ENST00000589577 ADSSP30520 456 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 SLC6A11P48066 632 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 IFNAR2P48551 515 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 RCAN1P53805 252 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 ZXDBP98169 803 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 EXOSC10Q01780 885 aaKnown RBP6.61□□□□□ -1.35
VPS25-204ENST00000589577 AKAP17AQ02040 695 aaKnown RBP6.61□□□□□ -1.35
VPS25-204ENST00000589577 FAM160A1Q05DH4 1040 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 KCNH2Q12809 1159 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 MYBPC2Q14324 1141 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 TMEM132AQ24JP5 1023 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 HLA-BQ31612 363 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 ADCK5Q3MIX3 580 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 HSF5Q4G112 596 aaPredicted RBP6.61□□□□□ -1.35
VPS25-204ENST00000589577 ZC2HC1CQ53FD0 456 aaPredicted RBP6.61□□□□□ -1.35
VPS25-204ENST00000589577 CCDC157Q569K6 752 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 EOGTQ5NDL2 527 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 ARHGAP40Q5TG30 622 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 ATF7IP2Q5U623 682 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 NCAPH2Q6IBW4 605 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 MAEAQ7L5Y9 396 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 MON1AQ86VX9 555 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 ZBTB8OSQ8IWT0 167 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 TPH2Q8IWU9 490 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 PGBD3Q8N328 593 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 PHTF2Q8N3S3 785 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 TTC16Q8NEE8 873 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 SPATA18Q8TC71 538 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 PIGOQ8TEQ8 1089 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 BRF1Q92994 677 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 MED8Q96G25 268 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 FAM20AQ96MK3 541 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 CYP2S1Q96SQ9 504 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 HSD17B14Q9BPX1 270 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 FAM124BQ9H5Z6 455 aaPredicted RBP6.61□□□□□ -1.35
VPS25-204ENST00000589577 PTPRHQ9HD43 1115 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 ANKEF1Q9NU02 776 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 SUSD2Q9UGT4 822 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 ZMYM5Q9UJ78 669 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 CYP8B1Q9UNU6 501 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 LIMCH1Q9UPQ0 1083 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 PCDHGB2Q9Y5G2 931 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 SLCO1B1Q9Y6L6 691 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 SPENQ96T58 3664 aaKnown RBP6.61□□□□□ -1.35
VPS25-204ENST00000589577 CRYBG3Q68DQ2 2970 aa6.61□□□□□ -1.35
VPS25-204ENST00000589577 A0A0A0MRY4 1105 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 A0A1B0GTW7 788 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 BRINP1O60477 761 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 KAT7O95251 611 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 CER1O95813 267 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 CYP17A1P05093 508 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 NDUFV2P19404 249 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 MATKP42679 507 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 CCR10P46092 362 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 GPR15P49685 360 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 TARDBPQ13148 414 aaKnown RBP eCLIP6.6□□□□□ -1.35
VPS25-204ENST00000589577 VEPH1Q14D04 833 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 NTRK3Q16288 839 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 INF2Q27J81 1249 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 MGAT5BQ3V5L5 792 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 PREPLQ4J6C6 727 aaPredicted RBP6.6□□□□□ -1.35
VPS25-204ENST00000589577 C6orf118Q5T5N4 469 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 OVOS1Q6IE37 1185 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 USP49Q70CQ1 688 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 MIB1Q86YT6 1006 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 TRIM22Q8IYM9 498 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 RGL4Q8IZJ4 473 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 ZCCHC9Q8N567 271 aaKnown RBP6.6□□□□□ -1.35
VPS25-204ENST00000589577 CCDC148Q8NFR7 591 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 SNRNP27Q8WVK2 155 aaKnown RBP6.6□□□□□ -1.35
VPS25-204ENST00000589577 DNASE2BQ8WZ79 361 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 FGF11Q92914 225 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 TMEM176AQ96HP8 235 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 EIF2AK1Q9BQI3 630 aaKnown RBP6.6□□□□□ -1.35
VPS25-204ENST00000589577 OXCT2Q9BYC2 517 aaPredicted RBP6.6□□□□□ -1.35
VPS25-204ENST00000589577 NRSN2Q9GZP1 204 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms