RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 PDGFRBP09619 1106 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 CCDC192P0DO97 292 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 DRD1P21728 446 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 BDNFP23560 247 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 MAGEA11P43364 429 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 IFNAR2P48551 515 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 ASIC1P78348 528 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 CYP27A1Q02318 531 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 KCNB1Q14721 858 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 ZNF77Q15935 545 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 CCDC6Q16204 474 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 E2F4Q16254 413 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 DPH6Q7L8W6 267 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 LIMS2Q7Z4I7 341 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 KBTBD6Q86V97 674 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 LINC00301Q8NCQ3 95 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 SH3RF2Q8TEC5 729 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 OSCP1Q8WVF1 389 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 ATP2A3Q93084 1043 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 MYLPFQ96A32 169 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 DHX58Q96C10 678 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 CNTNAP3BQ96NU0 1288 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 HHIPQ96QV1 700 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 MMS19Q96T76 1030 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 CNTNAP3Q9BZ76 1288 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 TRIM9Q9C026 710 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 LRRC27Q9C0I9 530 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 TNMDQ9H2S6 317 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 CRTAC1Q9NQ79 661 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 KBTBD4Q9NVX7 518 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 TFIP11Q9UBB9 837 aaKnown RBP12.63□□□□□ -0.39
MBD1-218ENST00000589541 MAGEC2Q9UBF1 373 aaPredicted RBP12.63□□□□□ -0.39
MBD1-218ENST00000589541 CDH9Q9ULB4 789 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 ACACBO00763 2458 aa12.63□□□□□ -0.39
MBD1-218ENST00000589541 TPRP12270 2363 aaKnown RBP12.62□□□□□ -0.39
MBD1-218ENST00000589541 CCDC163A0A0D9SF12 145 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 SPTLC2O15270 562 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 DLATP10515 647 aaKnown RBP12.62□□□□□ -0.39
MBD1-218ENST00000589541 HDCP19113 662 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 GRIK1P39086 918 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 USP4Q13107 963 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 SF3A2Q15428 464 aaKnown RBP12.62□□□□□ -0.39
MBD1-218ENST00000589541 SURF1Q15526 300 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 MAPRE1Q15691 268 aaKnown RBP12.62□□□□□ -0.39
MBD1-218ENST00000589541 SNRNP35Q16560 246 aaKnown RBP12.62□□□□□ -0.39
MBD1-218ENST00000589541 EML3Q32P44 896 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 PPM1JQ5JR12 505 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 TRAPPC11Q7Z392 1133 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 CACNA2D4Q7Z3S7 1137 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 WDR49Q8IV35 697 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 RDH13Q8NBN7 331 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 RPLP0P6Q8NHW5 317 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 EXOC4Q96A65 974 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 SPATA17Q96L03 361 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 ARRDC1-AS1Q9H2J1 176 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 KIAA1586Q9HCI6 787 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 GCNT4Q9P109 453 aa12.62□□□□□ -0.39
MBD1-218ENST00000589541 CHD8Q9HCK8 2581 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 EIF3DO15371 548 aaKnown RBP eCLIP12.61□□□□□ -0.39
MBD1-218ENST00000589541 FOXD2O60548 495 aaPredicted RBP12.61□□□□□ -0.39
MBD1-218ENST00000589541 TNNI1P19237 187 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 KCNA4P22459 653 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 WARSP23381 471 aaKnown RBP12.61□□□□□ -0.39
MBD1-218ENST00000589541 ANXA13P27216 316 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 RAP1GAPP47736 663 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 CYP2J2P51589 502 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 USP46P62068 366 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 AMPD3Q01432 767 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 PSMD2Q13200 908 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 FBXO43Q4G163 708 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 AASDHQ4L235 1098 aaPredicted RBP12.61□□□□□ -0.39
MBD1-218ENST00000589541 MDH1BQ5I0G3 518 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 FAM26FQ5R3K3 315 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 VSTM1Q6UX27 236 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 DENND5BQ6ZUT9 1274 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 EPM2AIP1Q7L775 607 aaPredicted RBP12.61□□□□□ -0.39
MBD1-218ENST00000589541 NELFCDQ8IXH7 590 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 CAMKK1Q8N5S9 505 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 IQUBQ8NA54 791 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 MYCBPAPQ8TBZ2 947 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 EZH1Q92800 747 aaPredicted RBP12.61□□□□□ -0.39
MBD1-218ENST00000589541 CD101Q93033 1021 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 CCDC127Q96BQ5 260 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 PCED1BQ96HM7 432 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 MRPL45Q9BRJ2 306 aaKnown RBP12.61□□□□□ -0.39
MBD1-218ENST00000589541 LINC00597Q9H2U6 94 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 SNX25Q9H3E2 840 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 CUEDC2Q9H467 287 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 AGPAT3Q9NRZ7 376 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 ARHGAP26Q9UNA1 814 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 OBSL1O75147 1896 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 SDK1Q7Z5N4 2213 aa12.61□□□□□ -0.39
MBD1-218ENST00000589541 DENND4CQ5VZ89 1909 aa12.6□□□□□ -0.39
MBD1-218ENST00000589541 F8VP50 259 aa12.6□□□□□ -0.39
MBD1-218ENST00000589541 K7ELQ4 463 aaPredicted RBP12.6□□□□□ -0.39
MBD1-218ENST00000589541 CLIC2O15247 247 aa12.6□□□□□ -0.39
MBD1-218ENST00000589541 TGFB1I1O43294 461 aa12.6□□□□□ -0.39
MBD1-218ENST00000589541 PPP6R2O75170 966 aa12.6□□□□□ -0.39
MBD1-218ENST00000589541 CST3P01034 146 aaPredicted RBP12.6□□□□□ -0.39
MBD1-218ENST00000589541 GNL1P36915 607 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms