RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 KRT3P12035 628 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 SYN1P17600 705 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 PTPN1P18031 435 aaKnown RBP12.72□□□□□ -0.37
CCBE1-203ENST00000589116 PCSK1P29120 753 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 MAGEA10P43363 369 aaPredicted RBP12.72□□□□□ -0.37
CCBE1-203ENST00000589116 RPL7AP62424 266 aaKnown RBP12.72□□□□□ -0.37
CCBE1-203ENST00000589116 TLE2Q04725 743 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 C2orf54Q08AI8 447 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 TIGD5Q53EQ6 642 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 SEL1L2Q5TEA6 688 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 METTL23Q86XA0 190 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 ZDHHC17Q8IUH5 632 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 RHOT1Q8IXI2 618 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 RUBCNQ92622 972 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 SUSD3Q96L08 255 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 GUCD1Q96NT3 240 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 HNRNPABQ99729 332 aaKnown RBP12.72□□□□□ -0.37
CCBE1-203ENST00000589116 PAAF1Q9BRP4 392 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 DDX43Q9NXZ2 648 aaKnown RBP12.72□□□□□ -0.37
CCBE1-203ENST00000589116 EHD2Q9NZN4 543 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 TMEM59LQ9UK28 342 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 TBX21Q9UL17 535 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 CDH9Q9ULB4 789 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 PCDHB7Q9Y5E2 793 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 TTC3P53804 2025 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 TARSL2A2RTX5 802 aaKnown RBP12.71□□□□□ -0.37
CCBE1-203ENST00000589116 HCRTO43612 131 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 CCDC130P13994 396 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 TYMPP19971 482 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 SCNN1AP37088 669 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 ACADSBP45954 432 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 RPL34P49207 117 aaKnown RBP12.71□□□□□ -0.37
CCBE1-203ENST00000589116 SLC8A3P57103 927 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 PDE4CQ08493 712 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 GLE1Q53GS7 698 aaKnown RBP12.71□□□□□ -0.37
CCBE1-203ENST00000589116 TMEM110Q86TL2 294 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 COLGALT2Q8IYK4 626 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 ABI1Q8IZP0 508 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 SLC2A14Q8TDB8 520 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 HSFY1Q96LI6 401 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 FAM161BQ96MY7 647 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 SYT15Q9BQS2 421 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 ANKZF1Q9H8Y5 726 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 ST7Q9NRC1 585 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 TBC1D13Q9NVG8 400 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 ARGLU1Q9NWB6 273 aaPredicted RBP12.71□□□□□ -0.37
CCBE1-203ENST00000589116 SMARCAL1Q9NZC9 954 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 TJP2Q9UDY2 1190 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 MICAL3Q7RTP6 2002 aa12.71□□□□□ -0.37
CCBE1-203ENST00000589116 TET1Q8NFU7 2136 aa12.71□□□□□ -0.38
CCBE1-203ENST00000589116 E5RJQ4 531 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 GOLGA8SH3BPF8 625 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 IGFBP6P24592 240 aaPredicted RBP12.7□□□□□ -0.38
CCBE1-203ENST00000589116 MCM3P25205 808 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 ADORA2BP29275 332 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 RFC2P35250 354 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 PLA2G4AP47712 749 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 MARCKSL1P49006 195 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 PLCB3Q01970 1234 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 RNASELQ05823 741 aaKnown RBP12.7□□□□□ -0.38
CCBE1-203ENST00000589116 ACAP1Q15027 740 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 PPP2R5EQ16537 467 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 FAM102AQ5T9C2 384 aaPredicted RBP12.7□□□□□ -0.38
CCBE1-203ENST00000589116 LRRC38Q5VT99 294 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 PMF1Q6P1K2 205 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 CD300LGQ6UXG3 332 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 FAM193BQ96PV7 902 aaPredicted RBP12.7□□□□□ -0.38
CCBE1-203ENST00000589116 ACBD6Q9BR61 282 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 MRPL9Q9BYD2 267 aaKnown RBP12.7□□□□□ -0.38
CCBE1-203ENST00000589116 C11orf49Q9H6J7 331 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 METTL5Q9NRN9 209 aaKnown RBP12.7□□□□□ -0.38
CCBE1-203ENST00000589116 RBM12Q9NTZ6 932 aaKnown RBP12.7□□□□□ -0.38
CCBE1-203ENST00000589116 LRFN2Q9ULH4 789 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 XPO1O14980 1071 aaKnown RBP12.7□□□□□ -0.38
CCBE1-203ENST00000589116 GJB6O95452 261 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 FGGP02679 453 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 RHOXF2BP0C7M4 288 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 H2AFXP16104 143 aaPredicted RBP12.7□□□□□ -0.38
CCBE1-203ENST00000589116 RFC1P35251 1148 aaPredicted RBP12.7□□□□□ -0.38
CCBE1-203ENST00000589116 PLA2G5P39877 138 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 ZNF252P-AS1Q0IIN9 211 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 FAM183BPQ6ZVS7 135 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 CPNE8Q86YQ8 564 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 NPAS4Q8IUM7 802 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 KATNAL2Q8IYT4 538 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 FUKQ8N0W3 1084 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 DIS3LQ8TF46 1054 aaKnown RBP12.7□□□□□ -0.38
CCBE1-203ENST00000589116 FAM122AQ96E09 287 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 SCLYQ96I15 445 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 RHOXF2Q9BQY4 288 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 DUSP16Q9BY84 665 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 PPP1R12CQ9BZL4 782 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 RAB21Q9UL25 225 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 PCDHB8Q9UN66 801 aa12.7□□□□□ -0.38
CCBE1-203ENST00000589116 ALPK3Q96L96 1907 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 GOLGA6L10A0A0M3HER8 536 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 KRIT1O00522 736 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 TRAPPC3O43617 180 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 DDHD2O94830 711 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 CLTBP09497 229 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms