RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CYP4A22Q5TCH4 519 aa23.51■■□□□ 1.35
ATG4D-209ENST00000588857 PLEKHA7Q6IQ23 1121 aa23.51■■□□□ 1.35
ATG4D-209ENST00000588857 KCNT2Q6UVM3 1135 aa23.51■■□□□ 1.35
ATG4D-209ENST00000588857 OR10T2Q8NGX3 314 aa23.51■■□□□ 1.35
ATG4D-209ENST00000588857 STK32AQ8WU08 396 aa23.51■■□□□ 1.35
ATG4D-209ENST00000588857 SLC35F5Q8WV83 523 aa23.51■■□□□ 1.35
ATG4D-209ENST00000588857 HERVK_113Q902F9 699 aa23.51■■□□□ 1.35
ATG4D-209ENST00000588857 PCED1BQ96HM7 432 aa23.51■■□□□ 1.35
ATG4D-209ENST00000588857 ZNF558Q96NG5 402 aa23.51■■□□□ 1.35
ATG4D-209ENST00000588857 ZBED2Q9BTP6 218 aa23.51■■□□□ 1.35
ATG4D-209ENST00000588857 DUSP16Q9BY84 665 aa23.51■■□□□ 1.35
ATG4D-209ENST00000588857 WDR35Q9P2L0 1181 aa23.51■■□□□ 1.35
ATG4D-209ENST00000588857 CLDN5O00501 218 aa23.5■■□□□ 1.35
ATG4D-209ENST00000588857 BUB1BO60566 1050 aaPredicted RBP23.5■■□□□ 1.35
ATG4D-209ENST00000588857 LAG3P18627 525 aa23.5■■□□□ 1.35
ATG4D-209ENST00000588857 SMAD3P84022 425 aaKnown RBP23.5■■□□□ 1.35
ATG4D-209ENST00000588857 MAMLD1Q13495 774 aa23.5■■□□□ 1.35
ATG4D-209ENST00000588857 CCDC142Q17RM4 750 aa23.5■■□□□ 1.35
ATG4D-209ENST00000588857 DNAJC24Q6P3W2 148 aa23.5■■□□□ 1.35
ATG4D-209ENST00000588857 FAM171BQ6P995 826 aa23.5■■□□□ 1.35
ATG4D-209ENST00000588857 TMEM173Q86WV6 379 aaPredicted RBP23.5■■□□□ 1.35
ATG4D-209ENST00000588857 LRRC57Q8N9N7 239 aa23.5■■□□□ 1.35
ATG4D-209ENST00000588857 MRPL42Q9Y6G3 142 aaKnown RBP23.5■■□□□ 1.35
ATG4D-209ENST00000588857 KIAA1671Q9BY89 1806 aa23.49■■□□□ 1.35
ATG4D-209ENST00000588857 ENC1O14682 589 aa23.49■■□□□ 1.35
ATG4D-209ENST00000588857 URI1O94763 535 aaPredicted RBP23.49■■□□□ 1.35
ATG4D-209ENST00000588857 GJB5O95377 273 aa23.49■■□□□ 1.35
ATG4D-209ENST00000588857 ERBB2P04626 1255 aa23.49■■□□□ 1.35
ATG4D-209ENST00000588857 FAM200BP0CF97 657 aa23.49■■□□□ 1.35
ATG4D-209ENST00000588857 NPR3P17342 541 aa23.49■■□□□ 1.35
ATG4D-209ENST00000588857 GABRB2P47870 512 aa23.49■■□□□ 1.35
ATG4D-209ENST00000588857 RGS7P49802 495 aa23.49■■□□□ 1.35
ATG4D-209ENST00000588857 ZNF268Q14587 947 aaPredicted RBP23.49■■□□□ 1.35
ATG4D-209ENST00000588857 PMF1Q6P1K2 205 aa23.49■■□□□ 1.35
ATG4D-209ENST00000588857 LLGL2Q6P1M3 1020 aa23.49■■□□□ 1.35
ATG4D-209ENST00000588857 PAQR9Q6ZVX9 377 aa23.49■■□□□ 1.35
ATG4D-209ENST00000588857 BCL7CQ8WUZ0 217 aaPredicted RBP23.49■■□□□ 1.35
ATG4D-209ENST00000588857 IGSF21Q96ID5 467 aa23.49■■□□□ 1.35
ATG4D-209ENST00000588857 MTIF3Q9H2K0 278 aaKnown RBP23.49■■□□□ 1.35
ATG4D-209ENST00000588857 CXXC1Q9P0U4 656 aaPredicted RBP23.49■■□□□ 1.35
ATG4D-209ENST00000588857 SLC4A7Q9Y6M7 1214 aa23.49■■□□□ 1.35
ATG4D-209ENST00000588857 PTPRDP23468 1912 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 FTCDO95954 541 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 TAP1Q03518 808 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 CTXN3Q4LDR2 81 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 ZNF280DQ6N043 979 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 FAM35AQ86V20 835 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 DCP1BQ8IZD4 617 aaKnown RBP23.48■■□□□ 1.35
ATG4D-209ENST00000588857 C3orf20Q8ND61 904 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 MYLPFQ96A32 169 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 TTPALQ9BTX7 342 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 SELENOOQ9BVL4 669 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 SLC4A5Q9BY07 1137 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 KRT82Q9NSB4 513 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 ANAPC7Q9UJX3 599 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 NLRC5Q86WI3 1866 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.48■■□□□ 1.35
ATG4D-209ENST00000588857 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.48■■□□□ 1.35
ATG4D-209ENST00000588857 E5RJQ4 531 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 TULP2O00295 520 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 XPO1O14980 1071 aaKnown RBP23.48■■□□□ 1.35
ATG4D-209ENST00000588857 ATP1A1P05023 1023 aaKnown RBP23.48■■□□□ 1.35
ATG4D-209ENST00000588857 MRPL58Q14197 206 aaKnown RBP23.48■■□□□ 1.35
ATG4D-209ENST00000588857 MESDQ14696 234 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 C11orf63Q6NUN7 778 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 PEX26Q7Z412 305 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 SLFN11Q7Z7L1 901 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 XYLT1Q86Y38 959 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 COLGALT1Q8NBJ5 622 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 SMARCD1Q96GM5 515 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 B3GALT6Q96L58 329 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 TMEM209Q96SK2 561 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 SLC9A7Q96T83 725 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 PKMYT1Q99640 499 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 CYLDQ9NQC7 956 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 AAASQ9NRG9 546 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 TJP2Q9UDY2 1190 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 INSL6Q9Y581 213 aa23.48■■□□□ 1.35
ATG4D-209ENST00000588857 LAMA2P24043 3122 aaKnown RBP23.47■■□□□ 1.35
ATG4D-209ENST00000588857 OR6C75A6NL08 312 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 TMEM110-MUSTN1A8MSY1 372 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 GOLGA8SH3BPF8 625 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 H7C4K7 107 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 MYO1FO00160 1098 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 AP1G2O75843 785 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 ACADSBP45954 432 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 PLA2G4AP47712 749 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 CDR1P51861 262 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 GSCP56915 257 aaPredicted RBP23.47■■□□□ 1.35
ATG4D-209ENST00000588857 HTRA4P83105 476 aaPredicted RBP23.47■■□□□ 1.35
ATG4D-209ENST00000588857 DCUN1D2Q6PH85 259 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 C4orf50Q6ZRC1 276 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 ANKS3Q6ZW76 656 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 TMEM110Q86TL2 294 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 LRRTM3Q86VH5 581 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 FEZF2Q8TBJ5 459 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 PHOSPHO2Q8TCD6 241 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 TMEM169Q96HH4 297 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 HSFY1Q96LI6 401 aa23.47■■□□□ 1.35
ATG4D-209ENST00000588857 ZCWPW1Q9H0M4 648 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms