RNA–Protein interactions for RNA: ENST00000588458.1

ABCA8-210, Transcript of ATP binding cassette subfamily A member 8, human

TSL 2

Gene ABCA8, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA8-210	ENST00000588458	GLIS3	Q8NEA6	775 aa		13.77	□□□□□ -0.21
ABCA8-210	ENST00000588458	ATG2B	Q96BY7	2078 aa		13.77	□□□□□ -0.21
ABCA8-210	ENST00000588458	CHFR	Q96EP1	664 aa		13.77	□□□□□ -0.21
ABCA8-210	ENST00000588458	TRMT2B	Q96GJ1	504 aa	Known RBP	13.77	□□□□□ -0.21
ABCA8-210	ENST00000588458	INTS4	Q96HW7	963 aa	Known RBP	13.77	□□□□□ -0.21
ABCA8-210	ENST00000588458	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
ABCA8-210	ENST00000588458	SLC22A12	Q96S37	553 aa		13.77	□□□□□ -0.21
ABCA8-210	ENST00000588458	SYT15	Q9BQS2	421 aa		13.77	□□□□□ -0.21
ABCA8-210	ENST00000588458	ECT2	Q9H8V3	914 aa		13.77	□□□□□ -0.21
ABCA8-210	ENST00000588458	HSPBP1	Q9NZL4	362 aa		13.77	□□□□□ -0.21
ABCA8-210	ENST00000588458	CDH9	Q9ULB4	789 aa		13.77	□□□□□ -0.21
ABCA8-210	ENST00000588458	SLC30A4	O14863	429 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	SPTLC2	O15270	562 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	GDF9	O60383	454 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	TADA3	O75528	432 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	DLAT	P10515	647 aa	Known RBP	13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	NASP	P49321	788 aa	Predicted RBP	13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	ASIC1	P78348	528 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	CYP27A1	Q02318	531 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	NR1H3	Q13133	447 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	KCNB1	Q14721	858 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	CCDC6	Q16204	474 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	NAIF1	Q69YI7	327 aa	Predicted RBP	13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	KBTBD6	Q86V97	674 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	LINC00301	Q8NCQ3	95 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	SH3RF2	Q8TEC5	729 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	OSCP1	Q8WVF1	389 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	GAB3	Q8WWW8	586 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	DHX58	Q96C10	678 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	CNTNAP3B	Q96NU0	1288 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	CNTNAP3	Q9BZ76	1288 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	ARRDC1-AS1	Q9H2J1	176 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	TNMD	Q9H2S6	317 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	LINC00597	Q9H2U6	94 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	KIAA1586	Q9HCI6	787 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	WNT6	Q9Y6F9	365 aa		13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.76	□□□□□ -0.21
ABCA8-210	ENST00000588458	PTPRJ	Q12913	1337 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	TCHH	Q07283	1943 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	CCDC163	A0A0D9SF12	145 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	C2orf78	A6NCI8	922 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	FOXD2	O60548	495 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	ABL1	P00519	1130 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	TNNI1	P19237	187 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	ANXA13	P27216	316 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	HOXD13	P35453	343 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	GNL1	P36915	607 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	MAGEA11	P43364	429 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	MAPRE1	Q15691	268 aa	Known RBP	13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	ZNF77	Q15935	545 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	FBXO43	Q4G163	708 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	AASDH	Q4L235	1098 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	VSTM1	Q6UX27	236 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	HS2ST1	Q7LGA3	356 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	TRAPPC11	Q7Z392	1133 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	C12orf50	Q8NA57	414 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	RPLP0P6	Q8NHW5	317 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	KBTBD7	Q8WVZ9	684 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	CD101	Q93033	1021 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	ATP2A3	Q93084	1043 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	MYLPF	Q96A32	169 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	ZNF396	Q96N95	335 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	HHIP	Q96QV1	700 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	FNBP1	Q96RU3	617 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	TRIM9	Q9C026	710 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	SNX25	Q9H3E2	840 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	CRTAC1	Q9NQ79	661 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	KBTBD4	Q9NVX7	518 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	TRPM5	Q9NZQ8	1165 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	GCNT4	Q9P109	453 aa		13.75	□□□□□ -0.21
ABCA8-210	ENST00000588458	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	CLIC2	O15247	247 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	CST3	P01034	146 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	WARS	P23381	471 aa	Known RBP	13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	CYP2J2	P51589	502 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	SF3A2	Q15428	464 aa	Known RBP	13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	EML3	Q32P44	896 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	PPM1J	Q5JR12	505 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	FAM26F	Q5R3K3	315 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	IL31	Q6EBC2	164 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	DENND5B	Q6ZUT9	1274 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	WDR49	Q8IV35	697 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	NELFCD	Q8IXH7	590 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	CAMKK1	Q8N5S9	505 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	IQUB	Q8NA54	791 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	OR6B3	Q8NGW1	331 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	ZNF507	Q8TCN5	953 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	CCDC127	Q96BQ5	260 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	LOXL4	Q96JB6	756 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	SPATA17	Q96L03	361 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	CUEDC2	Q9H467	287 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	TSC2	P49815	1807 aa		13.74	□□□□□ -0.21
ABCA8-210	ENST00000588458	ZNF638	Q14966	1978 aa	Known RBP	13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458		K7ELQ4	463 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	EIF3D	O15371	548 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	PPP6R2	O75170	966 aa		13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	PDE6C	P51160	858 aa		13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	USP46	P62068	366 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms