RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 GJA1P17302 382 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 PFKLP17858 780 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 GPR15P49685 360 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 CDR1P51861 262 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 PFKPQ01813 784 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 CCDC142Q17RM4 750 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 DPCR1Q3MIW9 517 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 GPR158Q5T848 1215 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 DENND5BQ6ZUT9 1274 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 ZSCAN18Q8TBC5 510 aaPredicted RBP10.74□□□□□ -0.69
TPM4-207ENST00000588032 MRPS31Q92665 395 aaKnown RBP10.74□□□□□ -0.69
TPM4-207ENST00000588032 PBXIP1Q96AQ6 731 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 ELMO3Q96BJ8 720 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 ASIC4Q96FT7 647 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 SMARCD1Q96GM5 515 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 ZSWIM3Q96MP5 696 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 MED10Q9BTT4 135 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 THAP9Q9H5L6 903 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 COMMD8Q9NX08 183 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 OBP2AQ9NY56 170 aa10.74□□□□□ -0.69
TPM4-207ENST00000588032 MAGED2Q9UNF1 606 aaPredicted RBP10.74□□□□□ -0.69
TPM4-207ENST00000588032 TTC28Q96AY4 2481 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 F8VP50 259 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 LRRN2O75325 713 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 RTN3O95197 1032 aaPredicted RBP10.73□□□□□ -0.69
TPM4-207ENST00000588032 PSMC3P17980 439 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 PDE6CP51160 858 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 CUL2Q13617 745 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 CCDC183Q5T5S1 534 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 SDHAF4Q5VUM1 108 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 SMYD5Q6GMV2 418 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 TANGO2Q6ICL3 276 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 SASS6Q6UVJ0 657 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 TMEM150AQ86TG1 271 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 FAM35AQ86V20 835 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 MON1AQ86VX9 555 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 CREBRFQ8IUR6 639 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 ARID3BQ8IVW6 561 aaPredicted RBP10.73□□□□□ -0.69
TPM4-207ENST00000588032 FUKQ8N0W3 1084 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 NUP93Q8N1F7 819 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 EHBP1Q8NDI1 1231 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 WHAMMQ8TF30 809 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 DEPDC1BQ8WUY9 529 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 TATDN2Q93075 761 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 CYFIP2Q96F07 1278 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 TMEM176AQ96HP8 235 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 FAM81BQ96LP2 452 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 HEXIM2Q96MH2 286 aaKnown RBP10.73□□□□□ -0.69
TPM4-207ENST00000588032 NT5C1BQ96P26 610 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 MED15Q96RN5 788 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 HNRNPABQ99729 332 aaKnown RBP10.73□□□□□ -0.69
TPM4-207ENST00000588032 KXD1Q9BQD3 176 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 RPP25Q9BUL9 199 aaKnown RBP10.73□□□□□ -0.69
TPM4-207ENST00000588032 TRMT61BQ9BVS5 477 aaKnown RBP10.73□□□□□ -0.69
TPM4-207ENST00000588032 TTLL2Q9BWV7 592 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 ZNF518BQ9C0D4 1074 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 CSNK1G1Q9HCP0 422 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 DMAP1Q9NPF5 467 aaPredicted RBP10.73□□□□□ -0.69
TPM4-207ENST00000588032 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.73□□□□□ -0.691e-6■■■■■ 327.6
TPM4-207ENST00000588032 CISHQ9NSE2 258 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 FBXL21Q9UKT6 434 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 NOTCH4Q99466 2003 aa10.73□□□□□ -0.69
TPM4-207ENST00000588032 NCOR1O75376 2440 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 FAM86C2PA6NEL3 165 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 CLDN5O00501 218 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 DPYSL4O14531 572 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 NARSO43776 548 aaKnown RBP10.72□□□□□ -0.69
TPM4-207ENST00000588032 AP1G2O75843 785 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 CD58P19256 250 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 PTMSP20962 102 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 FCARP24071 287 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 AVPR1AP37288 418 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 GPC5P78333 572 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 HFE2Q6ZVN8 426 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 PAQR9Q6ZVX9 377 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 MFSD6LQ8IWD5 586 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 SUGP1Q8IWZ8 645 aaKnown RBP10.72□□□□□ -0.69
TPM4-207ENST00000588032 CMTM8Q8IZV2 173 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 FBXL6Q8N531 539 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 CELF5Q8N6W0 485 aaKnown RBP10.72□□□□□ -0.69
TPM4-207ENST00000588032 LMO3Q8TAP4 145 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 ENOX1Q8TC92 643 aaKnown RBP10.72□□□□□ -0.69
TPM4-207ENST00000588032 SLC2A14Q8TDB8 520 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 OVCA2Q8WZ82 227 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 IRF7Q92985 503 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 JAKMIP2Q96AA8 810 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 SHDQ96IW2 340 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 CNOT6LQ96LI5 555 aaKnown RBP10.72□□□□□ -0.69
TPM4-207ENST00000588032 SLITRK1Q96PX8 696 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 TWNKQ96RR1 684 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 SLC46A2Q9BY10 475 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 SMOC2Q9H3U7 446 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 TRPV5Q9NQA5 729 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 ANO10Q9NW15 660 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 TRPM5Q9NZQ8 1165 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 KIAA1257Q9ULG3 409 aa10.72□□□□□ -0.69
TPM4-207ENST00000588032 GTPBP10A4D1E9 387 aaKnown RBP10.71□□□□□ -0.69
TPM4-207ENST00000588032 HEPACAM2A8MVW5 462 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 NRG2O14511 850 aaPredicted RBP10.71□□□□□ -0.69
TPM4-207ENST00000588032 CFHP08603 1231 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms