RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 MAPK6Q16659 721 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 BZW1Q7L1Q6 419 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 RHPN2Q8IUC4 686 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 DHX37Q8IY37 1157 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 ZNF276Q8N554 614 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 ARFGAP1Q8N6T3 406 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 FAM13CQ8NE31 585 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 DNERQ8NFT8 737 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 ZNF398Q8TD17 642 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 PAFAH2Q99487 392 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 WDR83Q9BRX9 315 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 ZWILCHQ9H900 591 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 STRIP2Q9ULQ0 834 aa17.69■□□□□ 0.42
PRKCSH-205ENST00000587327 E7ESA3 106 aa17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 LRCH4O75427 683 aa17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 KRT7P08729 469 aa17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 ADRA1DP25100 572 aa17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 PSMA2P25787 234 aa17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 RFC5P40937 340 aa17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 DUOXA2Q1HG44 320 aa17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 SMTNL2Q2TAL5 461 aa17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 KLHL38Q2WGJ6 581 aa17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 TAF1BQ53T94 588 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 FYB2Q5VWT5 728 aa17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 ZNF449Q6P9G9 518 aa17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 BBS12Q6ZW61 710 aa17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 MZB1Q8WU39 189 aa17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 TCHPQ9BT92 498 aa17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 RNPEPL1Q9HAU8 725 aa17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 NKX1-2Q9UD57 310 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-205ENST00000587327 IGKV6D-21A0A0A0MT36 114 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 SIGLEC16A6NMB1 481 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 ADM5C9JUS6 153 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 TOM1L1O75674 476 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 PIAS1O75925 651 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 CBX6O95503 412 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 KRT3P12035 628 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 IL1R2P27930 398 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 RPL22P35268 128 aaKnown RBP17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 TARBP2Q15633 366 aaKnown RBP17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 SEPT7Q16181 437 aaKnown RBP17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 TAZQ16635 292 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 PLEKHG4Q58EX7 1191 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 KCNT1Q5JUK3 1230 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 NLRP9Q7RTR0 991 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 ZBTB33Q86T24 672 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 FBXO36Q8NEA4 188 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 TCP10LQ8TDR4 215 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 RSAD2Q8WXG1 361 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 NPHS2Q9NP85 383 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 LRRC37A2A6NM11 1700 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 TM9SF1O15321 606 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 MSCO60682 206 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 DDNO94850 711 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 GNAZP19086 355 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 CALB2P22676 271 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 KDELR1P24390 212 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 LONP2Q86WA8 852 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 THNSL1Q8IYQ7 743 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 KIAA0319LQ8IZA0 1049 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 BANPQ8N9N5 519 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 ALKBH8Q96BT7 664 aaKnown RBP17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 ANKRD27Q96NW4 1050 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 VPS11Q9H270 941 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 ZFP69BQ9UJL9 534 aa17.67■□□□□ 0.42
PRKCSH-205ENST00000587327 PEX11AO75192 247 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 GM2AP17900 193 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 POLR2BP30876 1174 aaKnown RBP17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 TRPC3Q13507 836 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 HADHQ16836 314 aaKnown RBP17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 PTPN20Q4JDL3 420 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 DENND1BQ6P3S1 775 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 MTDHQ86UE4 582 aaKnown RBP17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 RIOX2Q8IUF8 465 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 PALM2Q8IXS6 379 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 JOSD2Q8TAC2 188 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 FNIP1Q8TF40 1166 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 DCAKDQ8WVC6 231 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 PRPF31Q8WWY3 499 aaKnown RBP17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 SAR1AQ9NR31 198 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 TCRBV7S3A2A0A539 114 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 WDR91A4D1P6 747 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 TROVE2P10155 538 aaKnown RBP eCLIP17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 EPHB2P29323 1055 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 ASPAP45381 313 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 EFNA5P52803 228 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 YWHAEP62258 255 aaKnown RBP17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 CLNKQ7Z7G1 428 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 PDIK1LQ8N165 341 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 STK32AQ8WU08 396 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 MRPL4Q9BYD3 311 aaKnown RBP17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 NRBP2Q9NSY0 501 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 LNPEPQ9UIQ6 1025 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 SRCAPQ6ZRS2 3230 aa17.66■□□□□ 0.42
PRKCSH-205ENST00000587327 E7ENQ6 273 aa17.65■□□□□ 0.42
PRKCSH-205ENST00000587327 SMAPO00193 183 aa17.65■□□□□ 0.42
PRKCSH-205ENST00000587327 ECM2O94769 699 aaPredicted RBP17.65■□□□□ 0.42
PRKCSH-205ENST00000587327 TMEM63AO94886 807 aa17.65■□□□□ 0.42
PRKCSH-205ENST00000587327 UBA1P22314 1058 aaKnown RBP17.65■□□□□ 0.42
PRKCSH-205ENST00000587327 PTPN4P29074 926 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms