RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 INTS8Q75QN2 995 aaKnown RBP18.87■□□□□ 0.61
TPM4-206ENST00000587201 MON1AQ86VX9 555 aa18.87■□□□□ 0.61
TPM4-206ENST00000587201 FAM186BQ8IYM0 893 aa18.87■□□□□ 0.61
TPM4-206ENST00000587201 NUP210Q8TEM1 1887 aaPredicted RBP18.87■□□□□ 0.61
TPM4-206ENST00000587201 FAM3CQ92520 227 aa18.87■□□□□ 0.61
TPM4-206ENST00000587201 ZFYVE19Q96K21 471 aa18.87■□□□□ 0.61
TPM4-206ENST00000587201 SPATA17Q96L03 361 aa18.87■□□□□ 0.61
TPM4-206ENST00000587201 TRPC7Q9HCX4 862 aa18.87■□□□□ 0.61
TPM4-206ENST00000587201 THG1LQ9NWX6 298 aaKnown RBP18.87■□□□□ 0.61
TPM4-206ENST00000587201 SHISA7A6NL88 538 aa18.86■□□□□ 0.61
TPM4-206ENST00000587201 SOBPA7XYQ1 873 aa18.86■□□□□ 0.61
TPM4-206ENST00000587201 TRIM66O15016 1216 aa18.86■□□□□ 0.61
TPM4-206ENST00000587201 TADA3O75528 432 aa18.86■□□□□ 0.61
TPM4-206ENST00000587201 SMC2O95347 1197 aa18.86■□□□□ 0.61
TPM4-206ENST00000587201 PIK3CAP42336 1068 aa18.86■□□□□ 0.61
TPM4-206ENST00000587201 KPNA1P52294 538 aaPredicted RBP18.86■□□□□ 0.61
TPM4-206ENST00000587201 PLCB2Q00722 1185 aa18.86■□□□□ 0.61
TPM4-206ENST00000587201 C1orf220Q5T0J3 134 aa18.86■□□□□ 0.61
TPM4-206ENST00000587201 DENND5BQ6ZUT9 1274 aa18.86■□□□□ 0.61
TPM4-206ENST00000587201 FRMD5Q7Z6J6 570 aa18.86■□□□□ 0.61
TPM4-206ENST00000587201 B3GALNT2Q8NCR0 500 aa18.86■□□□□ 0.61
TPM4-206ENST00000587201 SPATA6Q9NWH7 488 aaPredicted RBP18.86■□□□□ 0.61
TPM4-206ENST00000587201 HOOK1Q9UJC3 728 aaKnown RBP18.86■□□□□ 0.61
TPM4-206ENST00000587201 PIEZO1Q92508 2521 aa18.86■□□□□ 0.61
TPM4-206ENST00000587201 MIA3Q5JRA6 1907 aa18.86■□□□□ 0.61
TPM4-206ENST00000587201 TICRRQ7Z2Z1 1910 aa18.86■□□□□ 0.61
TPM4-206ENST00000587201 PROB1E7EW31 1015 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 HLA-DRAP01903 254 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 TRIM49P0CI25 452 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 TRIM49CP0CI26 452 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 CCNE1P24864 410 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 GCLMP48507 274 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 EDRF1Q3B7T1 1238 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 ZCWPW2Q504Y3 356 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 TTC8Q8TAM2 541 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 TAF4BQ92750 862 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 ERCC4Q92889 916 aaPredicted RBP18.85■□□□□ 0.61
TPM4-206ENST00000587201 USP13Q92995 863 aaPredicted RBP18.85■□□□□ 0.61
TPM4-206ENST00000587201 SMARCE1Q969G3 411 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 CLDN23Q96B33 292 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 C8orf48Q96LL4 319 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 CEP295NLQ96MC4 621 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 TIGD1Q96MW7 591 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 GSDMAQ96QA5 445 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 ELOVL4Q9GZR5 314 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 SDCBP2Q9H190 292 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 C8orf33Q9H7E9 229 aaPredicted RBP18.85■□□□□ 0.61
TPM4-206ENST00000587201 MMRN2Q9H8L6 949 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 KIF9Q9HAQ2 790 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 TDP1Q9NUW8 608 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 GTSE1Q9NYZ3 720 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 CCL26Q9Y258 94 aa18.85■□□□□ 0.61
TPM4-206ENST00000587201 COL4A2P08572 1712 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 F8VP50 259 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 CLDN5O00501 218 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 LAMTOR5O43504 91 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 GFRA3O60609 400 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 PRCPP42785 496 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 RPS9P46781 194 aaKnown RBP18.84■□□□□ 0.61
TPM4-206ENST00000587201 SOX9P48436 509 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 MLLT6P55198 1093 aaPredicted RBP18.84■□□□□ 0.61
TPM4-206ENST00000587201 ZNF658Q5TYW1 1059 aaPredicted RBP18.84■□□□□ 0.61
TPM4-206ENST00000587201 SPOPLQ6IQ16 392 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 MSANTD3Q96H12 275 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 TNIP3Q96KP6 325 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 MED10Q9BTT4 135 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 B3GNT5Q9BYG0 378 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 IMPG2Q9BZV3 1241 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 ZNF518BQ9C0D4 1074 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.84■□□□□ 0.612e-6■■■■■ 36.9
TPM4-206ENST00000587201 EHD2Q9NZN4 543 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 PCDHA5Q9Y5H7 936 aa18.84■□□□□ 0.61
TPM4-206ENST00000587201 ATP8B3O60423 1300 aa18.83■□□□□ 0.61
TPM4-206ENST00000587201 TRAV19A0A0A6YYK7 116 aa18.83■□□□□ 0.6
TPM4-206ENST00000587201 CETN3O15182 167 aa18.83■□□□□ 0.6
TPM4-206ENST00000587201 ASS1P00966 412 aaKnown RBP18.83■□□□□ 0.6
TPM4-206ENST00000587201 USP17L7P0C7H9 530 aa18.83■□□□□ 0.6
TPM4-206ENST00000587201 SP9P0CG40 484 aa18.83■□□□□ 0.6
TPM4-206ENST00000587201 USP46P62068 366 aa18.83■□□□□ 0.6
TPM4-206ENST00000587201 ENPEPQ07075 957 aa18.83■□□□□ 0.6
TPM4-206ENST00000587201 TNK2Q07912 1038 aa18.83■□□□□ 0.6
TPM4-206ENST00000587201 PPP3CAQ08209 521 aa18.83■□□□□ 0.6
TPM4-206ENST00000587201 FZD5Q13467 585 aa18.83■□□□□ 0.6
TPM4-206ENST00000587201 C1orf228Q6PIY5 440 aa18.83■□□□□ 0.6
TPM4-206ENST00000587201 EEF2KMTQ96G04 330 aa18.83■□□□□ 0.6
TPM4-206ENST00000587201 CYP2S1Q96SQ9 504 aa18.83■□□□□ 0.6
TPM4-206ENST00000587201 TSG101Q99816 390 aa18.83■□□□□ 0.6
TPM4-206ENST00000587201 GKN1Q9NS71 199 aa18.83■□□□□ 0.6
TPM4-206ENST00000587201 TRPM5Q9NZQ8 1165 aa18.83■□□□□ 0.6
TPM4-206ENST00000587201 DENND4CQ5VZ89 1909 aa18.82■□□□□ 0.6
TPM4-206ENST00000587201 MYO15AQ9UKN7 3530 aa18.82■□□□□ 0.6
TPM4-206ENST00000587201 SPECC1L-ADORA2AF8WAN1 911 aa18.82■□□□□ 0.6
TPM4-206ENST00000587201 CKMP06732 381 aa18.82■□□□□ 0.6
TPM4-206ENST00000587201 EPB41P11171 864 aaKnown RBP18.82■□□□□ 0.6
TPM4-206ENST00000587201 CACNA2D1P54289 1103 aa18.82■□□□□ 0.6
TPM4-206ENST00000587201 IFRD2Q12894 506 aaPredicted RBP18.82■□□□□ 0.6
TPM4-206ENST00000587201 ZNF268Q14587 947 aaPredicted RBP18.82■□□□□ 0.6
TPM4-206ENST00000587201 COBLL1Q53SF7 1204 aa18.82■□□□□ 0.6
TPM4-206ENST00000587201 CC2D1AQ6P1N0 951 aaPredicted RBP18.82■□□□□ 0.6
TPM4-206ENST00000587201 ZNF687Q8N1G0 1237 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms