RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 NPR3P17342 541 aa17.97■□□□□ 0.47
PRKCSH-203ENST00000586486 BDNFP23560 247 aa17.97■□□□□ 0.47
PRKCSH-203ENST00000586486 TAF3Q5VWG9 929 aa17.97■□□□□ 0.47
PRKCSH-203ENST00000586486 TRIM72Q6ZMU5 477 aa17.97■□□□□ 0.47
PRKCSH-203ENST00000586486 CCDC186Q7Z3E2 898 aa17.97■□□□□ 0.47
PRKCSH-203ENST00000586486 ZNF571Q7Z3V5 609 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-203ENST00000586486 PALB2Q86YC2 1186 aa17.97■□□□□ 0.47
PRKCSH-203ENST00000586486 SLC22A17Q8WUG5 538 aa17.97■□□□□ 0.47
PRKCSH-203ENST00000586486 DUSP16Q9BY84 665 aa17.97■□□□□ 0.47
PRKCSH-203ENST00000586486 CRISPLD1Q9H336 500 aa17.97■□□□□ 0.47
PRKCSH-203ENST00000586486 TLE6Q9H808 572 aa17.97■□□□□ 0.47
PRKCSH-203ENST00000586486 MYH10P35580 1976 aa17.97■□□□□ 0.47
PRKCSH-203ENST00000586486 SSU72P8A0A1W2PR75 194 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 M0QYV0 167 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 AP1G2O75843 785 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 LSM8O95777 96 aaKnown RBP17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 CFHP08603 1231 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 SETSIPP0DME0 302 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 CYP2F1P24903 491 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 CDH5P33151 784 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 BST2Q10589 180 aaKnown RBP17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 DUSP4Q13115 394 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 CLEC20AQ6ZU45 233 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 RTL10Q7L3V2 364 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 HDAC7Q8WUI4 952 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 PPP1R9BQ96SB3 815 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 RHOBTB2Q9BYZ6 727 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 PLEKHA4Q9H4M7 779 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 PNPLA8Q9NP80 782 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 DMAP1Q9NPF5 467 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 TMEM30AQ9NV96 361 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 MTCH2Q9Y6C9 303 aa17.96■□□□□ 0.47
PRKCSH-203ENST00000586486 TRIM66O15016 1216 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 SEC24AO95486 1093 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 PLEKP08567 350 aaPredicted RBP17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 ELF1P32519 619 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 GPD2P43304 727 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 NRIP1P48552 1158 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 TUFMP49411 452 aaKnown RBP17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 CACNA2D1P54289 1103 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 SLC8A3P57103 927 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 KCNC3Q14003 757 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 ADGRE1Q14246 886 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 DENND1BQ6P3S1 775 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 VPS36Q86VN1 386 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 TTC9BQ8N6N2 239 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 C8orf48Q96LL4 319 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 CEP295NLQ96MC4 621 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 DPP7Q9UHL4 492 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 CEP83Q9Y592 693 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 HCFC2Q9Y5Z7 792 aa17.95■□□□□ 0.46
PRKCSH-203ENST00000586486 PER2O15055 1255 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 CYP1A1P04798 512 aaPredicted RBP17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 PDE4CQ08493 712 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 CYP26C1Q6V0L0 522 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 CCDC149Q6ZUS6 474 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 RBM23Q86U06 439 aaKnown RBP17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 TMEM139Q8IV31 216 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 KREMEN2Q8NCW0 462 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 ZMIZ2Q8NF64 920 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 SLC35F5Q8WV83 523 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 GAS2L1Q99501 681 aaPredicted RBP17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 CHP1Q99653 195 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 SMOQ99835 787 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 UBXN6Q9BZV1 441 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 PDCL3Q9H2J4 239 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 CYP4F11Q9HBI6 524 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 YIPF1Q9Y548 306 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 PRRG1O14668 218 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 XPO1O14980 1071 aaKnown RBP17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 BEST1O76090 585 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 HOXD11P31277 338 aaPredicted RBP17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 SSTR3P32745 418 aaPredicted RBP17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 PLA2G4AP47712 749 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 CDR1P51861 262 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 RPL10AP62906 217 aaKnown RBP17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 NOMO3P69849 1222 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 ASTE1Q2TB18 679 aaPredicted RBP17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 MGAT5BQ3V5L5 792 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 TCEAL5Q5H9L2 206 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 ELMSAN1Q6PJG2 1045 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 TMTC1Q8IUR5 882 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 PASD1Q8IV76 773 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 TMEM35BQ8NCS4 154 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 SLC30A5Q8TAD4 765 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 UBA3Q8TBC4 463 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 STK32AQ8WU08 396 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 SECISBP2LQ93073 1101 aaKnown RBP17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 FAM161BQ96MY7 647 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 PCDHB18PQ96TA0 734 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 SEPT5Q99719 369 aaPredicted RBP17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 BAG1Q99933 345 aaPredicted RBP17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 SLC27A5Q9Y2P5 690 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 INSL5Q9Y5Q6 135 aa17.94■□□□□ 0.46
PRKCSH-203ENST00000586486 PRRC2BQ5JSZ5 2229 aaKnown RBP17.93■□□□□ 0.46
PRKCSH-203ENST00000586486 GREB1Q4ZG55 1949 aa17.93■□□□□ 0.46
PRKCSH-203ENST00000586486 F8VP50 259 aa17.93■□□□□ 0.46
PRKCSH-203ENST00000586486 DDX3XO00571 662 aaKnown RBP eCLIP17.93■□□□□ 0.46
PRKCSH-203ENST00000586486 UNGP13051 313 aaPredicted RBP17.93■□□□□ 0.46
PRKCSH-203ENST00000586486 EPCAMP16422 314 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms