RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 TUBGCP3Q96CW5 907 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 TRMT6Q9UJA5 497 aaKnown RBP13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NPTXRO95502 500 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 DENND1BQ6P3S1 775 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ILKAPQ9H0C8 392 aaPredicted RBP13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 THAP2Q9H0W7 228 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ZNF23P17027 643 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CHRNA5P30532 468 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NME5P56597 212 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 GALNTL6Q49A17 601 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 GLB1LQ6UWU2 654 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ZNF677Q86XU0 584 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 PHTF1Q9UMS5 762 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 A2ML1A8K2U0 1454 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CDC42BPGQ6DT37 1551 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ALKQ9UM73 1620 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RSPH10B2B2RC85 870 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 KBTBD13C9JR72 458 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 STX7O15400 261 aaKnown RBP13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 DDHD2O94830 711 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ITGB3P05106 788 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RSPH10BP0C881 870 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 TAF1CQ15572 869 aaPredicted RBP13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 AMHR2Q16671 573 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SLC44A2Q8IWA5 706 aaPredicted RBP13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 TBC1D16Q8TBP0 767 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 PNKPQ96T60 521 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NOD2Q9HC29 1040 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 EIF3LQ9Y262 564 aaKnown RBP13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 IGSF9BQ9UPX0 1349 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 GOLGA8TH3BQL2 631 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 MTSS1O43312 755 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 MAP3K6O95382 1288 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 FAM200BP0CF97 657 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 TRIM16LQ309B1 348 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 LINC00523Q86TU6 105 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 MMGT1Q8N4V1 131 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 DNAJC7Q99615 494 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RHBDL2Q9NX52 303 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RNF112Q9ULX5 631 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ZNF609O15014 1411 aa13.76□□□□□ -0.21
RAB11FIP4-210ENST00000585058 STX5Q13190 355 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ERAP2Q6P179 960 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 C4orf22Q6V702 233 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 BRINP3Q76B58 766 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CCDC33Q8N5R6 958 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RAD18Q9NS91 495 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 HEY2Q9UBP5 337 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 HSPA13P48723 471 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CACHD1Q5VU97 1274 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CLEC17AQ6ZS10 378 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 EPS8L3Q8TE67 593 aaKnown RBP13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SERPINB12Q96P63 405 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 TUBE1Q9UJT0 475 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CYP2C9P11712 490 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RGS2P41220 211 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 TKFCQ3LXA3 575 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 AGAP9Q5VTM2 703 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SUGP1Q8IWZ8 645 aaKnown RBP13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 PPP2R3CQ969Q6 453 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 L3MBTL3Q96JM7 780 aaPredicted RBP13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 MXRA8Q9BRK3 442 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 TARS2Q9BW92 718 aaKnown RBP13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 DMAP1Q9NPF5 467 aaPredicted RBP13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ABI2Q9NYB9 513 aaPredicted RBP13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NFKBIL1Q9UBC1 381 aaPredicted RBP13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ANXA9O76027 345 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 PDHBP11177 359 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CYP2B6P20813 491 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SLC13A5Q86YT5 568 aaPredicted RBP13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CASKIN2Q8WXE0 1202 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CD248Q9HCU0 757 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NMRK2Q9NPI5 230 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RPS6KL1Q9Y6S9 549 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SPATA31A3Q5VYP0 1347 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 M0QYT0 321 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NPEPPSP55786 919 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ORC1Q13415 861 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CYP51A1Q16850 503 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 PRMT7Q9NVM4 692 aaPredicted RBP13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 HAO1Q9UJM8 370 aa13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RUVBL2Q9Y230 463 aaKnown RBP13.75□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ALDH1A3P47895 512 aa13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CDH18Q13634 790 aa13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SMIM5Q71RC9 77 aa13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 GPR141Q7Z602 305 aa13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 TPCN2Q8NHX9 752 aa13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ATG4AQ8WYN0 398 aa13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NYAP2Q9P242 653 aa13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SOX13Q9UN79 622 aa13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ADGRL3Q9HAR2 1447 aa13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 PPRC1Q5VV67 1664 aaKnown RBP13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SLC26A4O43511 780 aa13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 STRNO43815 780 aa13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 KBTBD12Q3ZCT8 623 aa13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ALFQ53S48 1182 aa13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 UGT3A1Q6NUS8 523 aa13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SLITRK1Q96PX8 696 aa13.74□□□□□ -0.21
RAB11FIP4-210ENST00000585058 DDIT4Q9NX09 232 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms