RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 SLC22A12Q96S37 553 aa11□□□□□ -0.65
GGA3-219ENST00000584550 HAPLN2Q9GZV7 340 aa11□□□□□ -0.65
GGA3-219ENST00000584550 ZCWPW1Q9H0M4 648 aa11□□□□□ -0.65
GGA3-219ENST00000584550 LINC00597Q9H2U6 94 aa11□□□□□ -0.65
GGA3-219ENST00000584550 CCDC86Q9H6F5 360 aaKnown RBP11□□□□□ -0.65
GGA3-219ENST00000584550 ZDHHC4Q9NPG8 344 aa11□□□□□ -0.65
GGA3-219ENST00000584550 BCCIPQ9P287 314 aaKnown RBP eCLIP11□□□□□ -0.65
GGA3-219ENST00000584550 HSFX1Q9UBD0 423 aa11□□□□□ -0.65
GGA3-219ENST00000584550 UBQLN1Q9UMX0 589 aaKnown RBP11□□□□□ -0.65
GGA3-219ENST00000584550 RAXQ9Y2V3 346 aa11□□□□□ -0.65
GGA3-219ENST00000584550 PI4KAP42356 2102 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 GON4LQ3T8J9 2241 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 NPHP3-ACAD11A0A0J9YXS1 232 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 TTC26A0AVF1 554 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 CLDN3O15551 220 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 OPHN1O60890 802 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 TOM1L1O75674 476 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 YEATS4O95619 227 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 HAPLN1P10915 354 aaPredicted RBP10.99□□□□□ -0.65
GGA3-219ENST00000584550 HMGA1P17096 107 aaKnown RBP10.99□□□□□ -0.65
GGA3-219ENST00000584550 PPP2R3AQ06190 1150 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 MCM6Q14566 821 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 EML3Q32P44 896 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 LYSMD4Q5XG99 296 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 SLC23A3Q6PIS1 610 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 MON1AQ86VX9 555 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 SFTPA1Q8IWL2 248 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 EFCAB13Q8IY85 973 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 PGBD3Q8N328 593 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 ALLCQ8N6M5 410 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 SYT2Q8N9I0 419 aaPredicted RBP10.99□□□□□ -0.65
GGA3-219ENST00000584550 MRPS31Q92665 395 aaKnown RBP10.99□□□□□ -0.65
GGA3-219ENST00000584550 ATP2A3Q93084 1043 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 KIF9Q9HAQ2 790 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 PLEKHA5Q9HAU0 1116 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 CCDC39Q9UFE4 941 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 PILRBQ9UKJ0 227 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 CFAP45Q9UL16 551 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 MMP17Q9ULZ9 603 aa10.99□□□□□ -0.65
GGA3-219ENST00000584550 RBM19Q9Y4C8 960 aaKnown RBP10.99□□□□□ -0.65
GGA3-219ENST00000584550 TSC2P49815 1807 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 CEP192Q8TEP8 1941 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 PLXNB3Q9ULL4 1909 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 SLC26A4O43511 780 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 ALDH1A2O94788 518 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 PRB1P04280 392 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 KRT18P05783 430 aaKnown RBP10.98□□□□□ -0.65
GGA3-219ENST00000584550 CLTAP09496 248 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 CYP3A5P20815 502 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 DDX6P26196 483 aaKnown RBP eCLIP10.98□□□□□ -0.65
GGA3-219ENST00000584550 TIE1P35590 1138 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 P2RY2P41231 377 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 ME1P48163 572 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 SLC12A3P55017 1021 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 GFPT1Q06210 699 aaPredicted RBP10.98□□□□□ -0.65
GGA3-219ENST00000584550 NR1H3Q13133 447 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 TRIP6Q15654 476 aaKnown RBP10.98□□□□□ -0.65
GGA3-219ENST00000584550 ZNF423Q2M1K9 1284 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 ZC2HC1CQ53FD0 456 aaPredicted RBP10.98□□□□□ -0.65
GGA3-219ENST00000584550 RRAGBQ5VZM2 374 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 C1orf186Q6ZWK4 172 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 GPBP1Q86WP2 473 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 METTL23Q86XA0 190 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 MINDY1Q8N5J2 469 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 PDILTQ8N807 584 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 TXNDC5Q8NBS9 432 aaKnown RBP10.98□□□□□ -0.65
GGA3-219ENST00000584550 OLIG1Q8TAK6 271 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 ADAM32Q8TC27 787 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 LRRC15Q8TF66 581 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 HMGB4Q8WW32 186 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 RAD54LQ92698 747 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 BICD1Q96G01 975 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 SPACA7Q96KW9 195 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 PI4K2AQ9BTU6 479 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 CCSER1Q9C0I3 900 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 ZMYM5Q9UJ78 669 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 SLC6A14Q9UN76 642 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 PCDHB9Q9Y5E1 797 aa10.98□□□□□ -0.65
GGA3-219ENST00000584550 HELZ2Q9BYK8 2649 aaKnown RBP10.97□□□□□ -0.65
GGA3-219ENST00000584550 UPK3BL1B0FP48 263 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 UPK3BL2E5RIL1 263 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 SGK1O00141 431 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 CYB561D2O14569 222 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 SH3BP5O60239 455 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 CUTAO60888 179 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 PPP6R2O75170 966 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 PRPF40AO75400 957 aaKnown RBP10.97□□□□□ -0.65
GGA3-219ENST00000584550 KLF8O95600 359 aaPredicted RBP10.97□□□□□ -0.65
GGA3-219ENST00000584550 CKMP06732 381 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 CD59P13987 128 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 OPRD1P41143 372 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 SLC6A11P48066 632 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 FAM160A1Q05DH4 1040 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 MCL1Q07820 350 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 MAPK7Q13164 816 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 ZNF268Q14587 947 aaPredicted RBP10.97□□□□□ -0.65
GGA3-219ENST00000584550 ZNF77Q15935 545 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 ENOX2Q16206 610 aaKnown RBP10.97□□□□□ -0.65
GGA3-219ENST00000584550 DDR2Q16832 855 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 DUOXA1Q1HG43 343 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms