RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 SPATA6Q9NWH7 488 aaPredicted RBP22.89■■□□□ 1.25
PPP4R1-228ENST00000584074 CCL26Q9Y258 94 aa22.89■■□□□ 1.25
PPP4R1-228ENST00000584074 COL4A2P08572 1712 aa22.88■■□□□ 1.25
PPP4R1-228ENST00000584074 IKBKBO14920 756 aa22.88■■□□□ 1.25
PPP4R1-228ENST00000584074 MAPK13O15264 365 aa22.88■■□□□ 1.25
PPP4R1-228ENST00000584074 AVPR1AP37288 418 aa22.88■■□□□ 1.25
PPP4R1-228ENST00000584074 SOX9P48436 509 aa22.88■■□□□ 1.25
PPP4R1-228ENST00000584074 VAMP7P51809 220 aa22.88■■□□□ 1.25
PPP4R1-228ENST00000584074 ZCWPW2Q504Y3 356 aa22.88■■□□□ 1.25
PPP4R1-228ENST00000584074 ARHGAP29Q52LW3 1261 aa22.88■■□□□ 1.25
PPP4R1-228ENST00000584074 MAML2Q8IZL2 1156 aaPredicted RBP22.88■■□□□ 1.25
PPP4R1-228ENST00000584074 B3GALNT2Q8NCR0 500 aa22.88■■□□□ 1.25
PPP4R1-228ENST00000584074 TTC8Q8TAM2 541 aa22.88■■□□□ 1.25
PPP4R1-228ENST00000584074 FAM3CQ92520 227 aa22.88■■□□□ 1.25
PPP4R1-228ENST00000584074 USP13Q92995 863 aaPredicted RBP22.88■■□□□ 1.25
PPP4R1-228ENST00000584074 SPATA17Q96L03 361 aa22.88■■□□□ 1.25
PPP4R1-228ENST00000584074 SDCBP2Q9H190 292 aa22.88■■□□□ 1.25
PPP4R1-228ENST00000584074 NCAM2O15394 837 aa22.87■■□□□ 1.25
PPP4R1-228ENST00000584074 GFRA3O60609 400 aa22.87■■□□□ 1.25
PPP4R1-228ENST00000584074 CCNE1P24864 410 aa22.87■■□□□ 1.25
PPP4R1-228ENST00000584074 KPNA1P52294 538 aaPredicted RBP22.87■■□□□ 1.25
PPP4R1-228ENST00000584074 FAM160A1Q05DH4 1040 aa22.87■■□□□ 1.25
PPP4R1-228ENST00000584074 TNK2Q07912 1038 aa22.87■■□□□ 1.25
PPP4R1-228ENST00000584074 SGSM1Q2NKQ1 1148 aa22.87■■□□□ 1.25
PPP4R1-228ENST00000584074 FAM186BQ8IYM0 893 aa22.87■■□□□ 1.25
PPP4R1-228ENST00000584074 B3GNT5Q9BYG0 378 aa22.87■■□□□ 1.25
PPP4R1-228ENST00000584074 ZNF518BQ9C0D4 1074 aa22.87■■□□□ 1.25
PPP4R1-228ENST00000584074 TRPC7Q9HCX4 862 aa22.87■■□□□ 1.25
PPP4R1-228ENST00000584074 GTSE1Q9NYZ3 720 aa22.87■■□□□ 1.25
PPP4R1-228ENST00000584074 F8VP50 259 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 CLDN5O00501 218 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 SP9P0CG40 484 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 TRIM49P0CI25 452 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 TRIM49CP0CI26 452 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 RPL13P26373 211 aaKnown RBP22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 ANXA13P27216 316 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 RPS9P46781 194 aaKnown RBP22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 CACNA2D1P54289 1103 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 MLLT6P55198 1093 aaPredicted RBP22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 USP46P62068 366 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 ADAM9Q13443 819 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 INTS8Q75QN2 995 aaKnown RBP22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 ASCL5Q7RTU5 278 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 ERCC4Q92889 916 aaPredicted RBP22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 EEF2KMTQ96G04 330 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 SLC22A12Q96S37 553 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 CYP2S1Q96SQ9 504 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.86■■□□□ 1.254e-10■■■■■ 39.2
PPP4R1-228ENST00000584074 TDP1Q9NUW8 608 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 TMEM30AQ9NV96 361 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 THG1LQ9NWX6 298 aaKnown RBP22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 TICRRQ7Z2Z1 1910 aa22.86■■□□□ 1.25
PPP4R1-228ENST00000584074 NUP210Q8TEM1 1887 aaPredicted RBP22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 SOBPA7XYQ1 873 aa22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 HLA-DRAP01903 254 aa22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 PSMC2P35998 433 aaKnown RBP22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 PIK3CAP42336 1068 aa22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 MAGEA9P43362 315 aa22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 GCLMP48507 274 aa22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 PPP3CAQ08209 521 aa22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 SPOPLQ6IQ16 392 aa22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 DENND5BQ6ZUT9 1274 aa22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 RIN3Q8TB24 985 aa22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 C8orf48Q96LL4 319 aa22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 CEP295NLQ96MC4 621 aa22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 ELOVL4Q9GZR5 314 aa22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 C8orf33Q9H7E9 229 aaPredicted RBP22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 GKN1Q9NS71 199 aa22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 RMND1Q9NWS8 449 aa22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 R4GN57 208 aa22.85■■□□□ 1.25
PPP4R1-228ENST00000584074 TRIM66O15016 1216 aa22.84■■□□□ 1.25
PPP4R1-228ENST00000584074 LAMTOR5O43504 91 aa22.84■■□□□ 1.25
PPP4R1-228ENST00000584074 ASS1P00966 412 aaKnown RBP22.84■■□□□ 1.25
PPP4R1-228ENST00000584074 KRT13P13646 458 aa22.84■■□□□ 1.25
PPP4R1-228ENST00000584074 P4HA1P13674 534 aa22.84■■□□□ 1.25
PPP4R1-228ENST00000584074 PRCPP42785 496 aa22.84■■□□□ 1.25
PPP4R1-228ENST00000584074 PLCB2Q00722 1185 aa22.84■■□□□ 1.25
PPP4R1-228ENST00000584074 TXNDC11Q6PKC3 985 aa22.84■■□□□ 1.25
PPP4R1-228ENST00000584074 TAF4BQ92750 862 aa22.84■■□□□ 1.25
PPP4R1-228ENST00000584074 NKD2Q969F2 451 aaPredicted RBP22.84■■□□□ 1.25
PPP4R1-228ENST00000584074 LMAN1LQ9HAT1 526 aa22.84■■□□□ 1.25
PPP4R1-228ENST00000584074 WDR87Q6ZQQ6 2873 aa22.84■■□□□ 1.25
PPP4R1-228ENST00000584074 MIA3Q5JRA6 1907 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 TRAV19A0A0A6YYK7 116 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 C2orf78A6NCI8 922 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 PRR23AA6NEV1 266 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 SPECC1L-ADORA2AF8WAN1 911 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 SMC2O95347 1197 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 NOP14P78316 857 aaKnown RBP22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 MTAPQ13126 283 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 ORC1Q13415 861 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 EDRF1Q3B7T1 1238 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 ZNF658Q5TYW1 1059 aaPredicted RBP22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 ACOT1Q86TX2 421 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 TAS1R2Q8TE23 839 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 MSANTD3Q96H12 275 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 GSDMAQ96QA5 445 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 FAM83CQ9BQN1 747 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 TTLL2Q9BWV7 592 aa22.83■■□□□ 1.25
PPP4R1-228ENST00000584074 MMRN2Q9H8L6 949 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms