RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 TLR6Q9Y2C9 796 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 GDAQ9Y2T3 454 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 CDY1Q9Y6F8 540 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 ZZEF1O43149 2961 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 NUP205Q92621 2012 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 TNRC6BQ9UPQ9 1833 aaKnown RBP8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 ARNTLO00327 626 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 CPLX1O14810 134 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 TADA2AO75478 443 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 C1RP00736 705 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 RHOP08100 348 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 GSTP1P09211 210 aaKnown RBP8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 GJA1P17302 382 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 HOXA9P31269 272 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 ROR1Q01973 937 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 CSTF1Q05048 431 aaKnown RBP8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 ZNF252P-AS1Q0IIN9 211 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 SRSF5Q13243 272 aaKnown RBP8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 PUM1Q14671 1186 aaKnown RBP eCLIP8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 UPP1Q16831 310 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 PPM1LQ5SGD2 360 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 DAW1Q8N136 415 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 LRRC3BQ96PB8 259 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 EPC1Q9H2F5 836 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 KBTBD4Q9NVX7 518 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 SPATA6Q9NWH7 488 aaPredicted RBP8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 ORC3Q9UBD5 711 aaPredicted RBP8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 SMG5Q9UPR3 1016 aaKnown RBP8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 CYP46A1Q9Y6A2 500 aa8.66□□□□□ -1.02
PPP4R1-225ENST00000583438 CEP295Q9C0D2 2601 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 TMEM189-UBE2V1I3L0A0 370 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 PRKCBP05771 671 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 HNRNPA1P09651 372 aaKnown RBP eCLIP8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 PSMA5P28066 241 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 TXKP42681 527 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 SOX9P48436 509 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 GUCY1B3Q02153 619 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 CALCRLQ16602 461 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 DUOXA2Q1HG44 320 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 PABPC1LQ4VXU2 614 aaKnown RBP8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 ZNF394Q53GI3 561 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 FAM78AQ5JUQ0 283 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 VITQ6UXI7 678 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 ALKAL1Q6UXT8 129 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 OTUD6AQ7L8S5 288 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 TTC9BQ8N6N2 239 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 PHC3Q8NDX5 983 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 C18orf25Q96B23 403 aaPredicted RBP8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 CORO1BQ9BR76 489 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 LRRC3Q9BY71 257 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 TRIM6Q9C030 488 aaPredicted RBP8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 HAPLN2Q9GZV7 340 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 SEMA4AQ9H3S1 761 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 CBX8Q9HC52 389 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 PTPRHQ9HD43 1115 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 CEP72Q9P209 647 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 STK39Q9UEW8 545 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 RALYQ9UKM9 306 aaKnown RBP8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 SSX2IPQ9Y2D8 614 aa8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.65□□□□□ -1.02
PPP4R1-225ENST00000583438 ARHGEF37A1IGU5 675 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 EIF4EBP3O60516 100 aaPredicted RBP8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 NEMFO60524 1076 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 ABLIM3O94929 683 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 THP07101 528 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 POU2F2P09086 479 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 LIG1P18858 919 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 TFE3P19532 575 aaPredicted RBP8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 KRT2P35908 639 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 VIPR2P41587 438 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 CDR1P51861 262 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 MAPK7Q13164 816 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 TFDP1Q14186 410 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 PCBP1Q15365 356 aaKnown RBP eCLIP8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 ZNF528Q3MIS6 628 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 SEZ6Q53EL9 994 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 XKR4Q5GH76 650 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 STXBP5Q5T5C0 1151 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 PKN3Q6P5Z2 889 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 Q6ZS52 159 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 KCNK18Q7Z418 384 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 NT5DC4Q86YG4 428 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 RELL1Q8IUW5 271 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 DIS3L2Q8IYB7 885 aaKnown RBP8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 SLFN12Q8IYM2 578 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 FAM177A1Q8N128 213 aaPredicted RBP8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 C4orf32Q8N8J7 132 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 LRRC15Q8TF66 581 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 GTF3C6Q969F1 213 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 CHFRQ96EP1 664 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 TMEM74Q96NL1 305 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 MRPL18Q9H0U6 180 aaKnown RBP8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 CDT1Q9H211 546 aa8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 CCDC86Q9H6F5 360 aaKnown RBP8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 RBM12Q9NTZ6 932 aaKnown RBP8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 PRMT7Q9NVM4 692 aaPredicted RBP8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 POLR3BQ9NW08 1133 aaPredicted RBP8.64□□□□□ -1.03
PPP4R1-225ENST00000583438 FBXO4Q9UKT5 387 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms