RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 KRI1Q8N9T8 703 aaKnown RBP17.34■□□□□ 0.37
SREBF1-221ENST00000583080 USP33Q8TEY7 942 aa17.34■□□□□ 0.37
SREBF1-221ENST00000583080 HVCN1Q96D96 273 aa17.34■□□□□ 0.37
SREBF1-221ENST00000583080 TMX3Q96JJ7 454 aa17.34■□□□□ 0.37
SREBF1-221ENST00000583080 TBC1D7Q9P0N9 293 aa17.34■□□□□ 0.37
SREBF1-221ENST00000583080 SIX4Q9UIU6 781 aa17.34■□□□□ 0.37
SREBF1-221ENST00000583080 SNX9Q9Y5X1 595 aa17.34■□□□□ 0.37
SREBF1-221ENST00000583080 FAM208BQ5VWN6 2430 aa17.33■□□□□ 0.37
SREBF1-221ENST00000583080 GOLGA8IPA6NC78 632 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 GOLGA8JA6NMD2 632 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 SPINK2P20155 84 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 DDIT3P35638 169 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 OPRD1P41143 372 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 CASP5P51878 434 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 ZXDBP98169 803 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 FOXC1Q12948 553 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 KCNB1Q14721 858 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 POSTNQ15063 836 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 GAB4Q2WGN9 574 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 CFAP221Q4G0U5 840 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 SH3PXD2AQ5TCZ1 1133 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 ANO7Q6IWH7 933 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 UNQ6494/PRO21346Q6UXR6 183 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 SPATA2LQ8IUW3 424 aaPredicted RBP17.33■□□□□ 0.36
SREBF1-221ENST00000583080 TMEM86AQ8N2M4 240 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 LRRC52Q8N7C0 313 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 EXOC4Q96A65 974 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 EPSTI1Q96J88 318 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 FGFBP2Q9BYJ0 223 aa17.33■□□□□ 0.36
SREBF1-221ENST00000583080 RBAKQ9NYW8 714 aaPredicted RBP17.33■□□□□ 0.36
SREBF1-221ENST00000583080 THADAQ6YHU6 1953 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 PTPRDP23468 1912 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 K7EQS6 105 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 ATP2C2O75185 946 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 TOP3BO95985 862 aaKnown RBP17.32■□□□□ 0.36
SREBF1-221ENST00000583080 KRT19P08727 400 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 HNRNPLP14866 589 aaKnown RBP eCLIP17.32■□□□□ 0.36
SREBF1-221ENST00000583080 PSMC1P62191 440 aaKnown RBP17.32■□□□□ 0.36
SREBF1-221ENST00000583080 SF3A1Q15459 793 aaKnown RBP17.32■□□□□ 0.36
SREBF1-221ENST00000583080 C8orf34Q49A92 452 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 C2orf27AQ580R0 203 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 L1TD1Q5T7N2 865 aaKnown RBP17.32■□□□□ 0.36
SREBF1-221ENST00000583080 LMBRD2Q68DH5 695 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-221ENST00000583080 RASSF3Q86WH2 238 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 SFTPA1Q8IWL2 248 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 CSGALNACT2Q8N6G5 542 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 MDGA1Q8NFP4 955 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 MYLPFQ96A32 169 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 CBWD1Q9BRT8 395 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 MTMR12Q9C0I1 747 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 MRPL44Q9H9J2 332 aaKnown RBP17.32■□□□□ 0.36
SREBF1-221ENST00000583080 GDAP2Q9NXN4 497 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 ARHGAP26Q9UNA1 814 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 WASF3Q9UPY6 502 aa17.32■□□□□ 0.36
SREBF1-221ENST00000583080 PTPRJQ12913 1337 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 MYMKA6NI61 221 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 GABRDO14764 452 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 SCAMP3O14828 347 aaKnown RBP17.31■□□□□ 0.36
SREBF1-221ENST00000583080 TCF3P15923 654 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 USP46P62068 366 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 RABEP1Q15276 862 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 SOWAHAQ2M3V2 549 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 CYP2U1Q7Z449 544 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 CCDC33Q8N5R6 958 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 TOP6BLQ8N6T0 577 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 NOC3LQ8WTT2 800 aaKnown RBP17.31■□□□□ 0.36
SREBF1-221ENST00000583080 KBTBD7Q8WVZ9 684 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 DNAJC19Q96DA6 116 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 FUBP3Q96I24 572 aaKnown RBP eCLIP17.31■□□□□ 0.36
SREBF1-221ENST00000583080 CNOT6LQ96LI5 555 aaKnown RBP17.31■□□□□ 0.36
SREBF1-221ENST00000583080 ACCSQ96QU6 501 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 SYT15Q9BQS2 421 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 PDE11AQ9HCR9 933 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 CRTAC1Q9NQ79 661 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 ITGA11Q9UKX5 1188 aa17.31■□□□□ 0.36
SREBF1-221ENST00000583080 CDX4O14627 284 aaPredicted RBP17.3■□□□□ 0.36
SREBF1-221ENST00000583080 KHNYNO15037 678 aaKnown RBP17.3■□□□□ 0.36
SREBF1-221ENST00000583080 GCNT3O95395 438 aa17.3■□□□□ 0.36
SREBF1-221ENST00000583080 NFATC1O95644 943 aa17.3■□□□□ 0.36
SREBF1-221ENST00000583080 BMP15O95972 392 aa17.3■□□□□ 0.36
SREBF1-221ENST00000583080 CYP17A1P05093 508 aa17.3■□□□□ 0.36
SREBF1-221ENST00000583080 CHRM1P11229 460 aaPredicted RBP17.3■□□□□ 0.36
SREBF1-221ENST00000583080 HDCP19113 662 aa17.3■□□□□ 0.36
SREBF1-221ENST00000583080 PCSK1P29120 753 aa17.3■□□□□ 0.36
SREBF1-221ENST00000583080 MESP2Q0VG99 397 aa17.3■□□□□ 0.36
SREBF1-221ENST00000583080 NR1H3Q13133 447 aa17.3■□□□□ 0.36
SREBF1-221ENST00000583080 USP39Q53GS9 565 aaKnown RBP17.3■□□□□ 0.36
SREBF1-221ENST00000583080 DAB2IPQ5VWQ8 1189 aa17.3■□□□□ 0.36
SREBF1-221ENST00000583080 FAM171BQ6P995 826 aa17.3■□□□□ 0.36
SREBF1-221ENST00000583080 FSIP1Q8NA03 581 aa17.3■□□□□ 0.36
SREBF1-221ENST00000583080 CACTINQ8WUQ7 758 aaKnown RBP17.3■□□□□ 0.36
SREBF1-221ENST00000583080 TMEM121BQ9BXQ6 578 aaPredicted RBP17.3■□□□□ 0.36
SREBF1-221ENST00000583080 TMEM9BQ9NQ34 198 aa17.3■□□□□ 0.36
SREBF1-221ENST00000583080 ZMIZ1Q9ULJ6 1067 aa17.3■□□□□ 0.36
SREBF1-221ENST00000583080 MMP17Q9ULZ9 603 aa17.3■□□□□ 0.36
SREBF1-221ENST00000583080 EXOC7Q9UPT5 735 aa17.3■□□□□ 0.36
SREBF1-221ENST00000583080 LEFTY2O00292 366 aa17.29■□□□□ 0.36
SREBF1-221ENST00000583080 LMO2P25791 158 aa17.29■□□□□ 0.36
SREBF1-221ENST00000583080 MAGEA11P43364 429 aa17.29■□□□□ 0.36
SREBF1-221ENST00000583080 LHX1P48742 406 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms