RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 ASB7Q9H672 318 aa14.37□□□□□ -0.11
SRSF1-205ENST00000582730 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.37□□□□□ -0.11
SRSF1-205ENST00000582730 CST8O60676 142 aa14.37□□□□□ -0.11
SRSF1-205ENST00000582730 SNAI1O95863 264 aaPredicted RBP14.37□□□□□ -0.11
SRSF1-205ENST00000582730 SMPD1P17405 629 aa14.37□□□□□ -0.11
SRSF1-205ENST00000582730 KLRC2P26717 231 aa14.37□□□□□ -0.11
SRSF1-205ENST00000582730 CDO1Q16878 200 aa14.37□□□□□ -0.11
SRSF1-205ENST00000582730 MAMDC4Q6UXC1 1216 aa14.37□□□□□ -0.11
SRSF1-205ENST00000582730 XYLT1Q86Y38 959 aa14.37□□□□□ -0.11
SRSF1-205ENST00000582730 MRRFQ96E11 262 aaKnown RBP14.37□□□□□ -0.11
SRSF1-205ENST00000582730 APOL6Q9BWW8 343 aa14.37□□□□□ -0.11
SRSF1-205ENST00000582730 NEU2Q9Y3R4 380 aa14.37□□□□□ -0.11
SRSF1-205ENST00000582730 DNAJC8O75937 253 aaPredicted RBP14.36□□□□□ -0.11
SRSF1-205ENST00000582730 RNF8O76064 485 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 NPTXRO95502 500 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 VIMP08670 466 aaKnown RBP14.36□□□□□ -0.11
SRSF1-205ENST00000582730 CREB1P16220 341 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 RGS7P49802 495 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 ELF3P78545 371 aaPredicted RBP14.36□□□□□ -0.11
SRSF1-205ENST00000582730 GLRA4Q5JXX5 417 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 ERMARDQ5T6L9 678 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 GPR142Q7Z601 462 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 EXOC3L1Q86VI1 746 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 KCTD6Q8NC69 237 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 CHMP6Q96FZ7 201 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 LHX5Q9H2C1 402 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 KDM4CQ9H3R0 1056 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 MGAMO43451 1857 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 KRT7P08729 469 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 CD48P09326 243 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 MTM1Q13496 603 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 TAF5Q15542 800 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 FAM187BQ17R55 369 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 ACCSLQ4AC99 568 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 OR6B2Q6IFH4 312 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 HIBCHQ6NVY1 386 aaPredicted RBP14.36□□□□□ -0.11
SRSF1-205ENST00000582730 RFX6Q8HWS3 928 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 C12orf29Q8N999 325 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 ACTL9Q8TC94 416 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 BRI3BPQ8WY22 251 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 TBC1D31Q96DN5 1066 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 TMEM109Q9BVC6 243 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 ROPN1BQ9BZX4 212 aaPredicted RBP14.36□□□□□ -0.11
SRSF1-205ENST00000582730 ADAM7Q9H2U9 754 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 ROPN1Q9HAT0 212 aaPredicted RBP14.36□□□□□ -0.11
SRSF1-205ENST00000582730 HES2Q9Y543 173 aa14.36□□□□□ -0.11
SRSF1-205ENST00000582730 NEBLO76041 1014 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 ITGBL1O95965 494 aaPredicted RBP14.35□□□□□ -0.11
SRSF1-205ENST00000582730 MAGEA4P43358 317 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 VCPP55072 806 aaKnown RBP14.35□□□□□ -0.11
SRSF1-205ENST00000582730 RBP5P82980 135 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 OTUD4Q01804 1114 aaKnown RBP14.35□□□□□ -0.11
SRSF1-205ENST00000582730 ALLCQ8N6M5 410 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 GTF3C2Q8WUA4 911 aaPredicted RBP14.35□□□□□ -0.11
SRSF1-205ENST00000582730 P3H4Q92791 437 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 NOD2Q9HC29 1040 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 BAIAP2L1Q9UHR4 511 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.35□□□□□ -0.115e-6■■□□□ 11.8
SRSF1-205ENST00000582730 SNX9Q9Y5X1 595 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 A0A1B0GUA9 196 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 ATP6V1G2O95670 118 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 GHRP10912 638 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 PECAM1P16284 738 aaPredicted RBP14.35□□□□□ -0.11
SRSF1-205ENST00000582730 ATICP31939 592 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 GBP2P32456 591 aaPredicted RBP14.35□□□□□ -0.11
SRSF1-205ENST00000582730 COPS2P61201 443 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 CATSPER4Q7RTX7 472 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 ARFGAP1Q8N6T3 406 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 NIPA2Q8N8Q9 360 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 CXCL16Q9H2A7 254 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 FAM49BQ9NUQ9 324 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 SNTG2Q9NY99 539 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 DNALI1O14645 258 aaPredicted RBP14.35□□□□□ -0.11
SRSF1-205ENST00000582730 MMP3P08254 477 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 GTF2A2P52657 109 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 SLC25A11Q02978 314 aaKnown RBP14.35□□□□□ -0.11
SRSF1-205ENST00000582730 CCHCR1Q8TD31 782 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 SERPINB12Q96P63 405 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 CCDC77Q9BR77 488 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 VPS37BQ9H9H4 285 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 WDR35Q9P2L0 1181 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 TSPAN16Q9UKR8 245 aa14.35□□□□□ -0.11
SRSF1-205ENST00000582730 ANK1P16157 1881 aa14.34□□□□□ -0.11
SRSF1-205ENST00000582730 TMEM120BA0PK00 339 aa14.34□□□□□ -0.11
SRSF1-205ENST00000582730 GLTPD2A6NH11 291 aa14.34□□□□□ -0.11
SRSF1-205ENST00000582730 CCT8L1PA6NM43 557 aa14.34□□□□□ -0.11
SRSF1-205ENST00000582730 DYNC1LI2O43237 492 aaPredicted RBP14.34□□□□□ -0.11
SRSF1-205ENST00000582730 STRNO43815 780 aa14.34□□□□□ -0.11
SRSF1-205ENST00000582730 VDRP11473 427 aa14.34□□□□□ -0.11
SRSF1-205ENST00000582730 ATP5DP30049 168 aa14.34□□□□□ -0.11
SRSF1-205ENST00000582730 MIPP30301 263 aa14.34□□□□□ -0.11
SRSF1-205ENST00000582730 POU5F1BQ06416 359 aa14.34□□□□□ -0.11
SRSF1-205ENST00000582730 NAA25Q14CX7 972 aa14.34□□□□□ -0.11
SRSF1-205ENST00000582730 TMED2Q15363 201 aa14.34□□□□□ -0.11
SRSF1-205ENST00000582730 DGKDQ16760 1214 aa14.34□□□□□ -0.11
SRSF1-205ENST00000582730 PRAMEF19Q5SWL8 479 aa14.34□□□□□ -0.11
SRSF1-205ENST00000582730 SRRM1Q8IYB3 904 aaKnown RBP14.34□□□□□ -0.11
SRSF1-205ENST00000582730 LINC01465Q8N7H1 131 aa14.34□□□□□ -0.11
SRSF1-205ENST00000582730 RSAD2Q8WXG1 361 aa14.34□□□□□ -0.11
SRSF1-205ENST00000582730 MAML3Q96JK9 1138 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms