RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 OBP2AQ9NY56 170 aa20.79■□□□□ 0.92
SREBF1-220ENST00000581707 COL4A3Q01955 1670 aa20.79■□□□□ 0.92
SREBF1-220ENST00000581707 OBSL1O75147 1896 aa20.79■□□□□ 0.92
SREBF1-220ENST00000581707 GREB1Q4ZG55 1949 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 MIA3Q5JRA6 1907 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 TICRRQ7Z2Z1 1910 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 F5P12259 2224 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 FAM170BA6NMN3 283 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 SOBPA7XYQ1 873 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 PRAMEF12O95522 483 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 ASS1P00966 412 aaKnown RBP20.78■□□□□ 0.92
SREBF1-220ENST00000581707 ANXA13P27216 316 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 FCHO2Q0JRZ9 810 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 UBXN2BQ14CS0 331 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 TXNDC8Q6A555 127 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 ZNF852Q6ZMS4 543 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 MON1AQ86VX9 555 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 NELL2Q99435 816 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 OSBPL6Q9BZF3 934 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 SDCBP2Q9H190 292 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 MMRN2Q9H8L6 949 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 DLGAP2Q9P1A6 1054 aa20.78■□□□□ 0.92
SREBF1-220ENST00000581707 MTF2Q9Y483 593 aaPredicted RBP20.78■□□□□ 0.92
SREBF1-220ENST00000581707 TRIM66O15016 1216 aa20.77■□□□□ 0.92
SREBF1-220ENST00000581707 CHADO15335 359 aa20.77■□□□□ 0.92
SREBF1-220ENST00000581707 EPB41P11171 864 aaKnown RBP20.77■□□□□ 0.92
SREBF1-220ENST00000581707 GTF2H1P32780 548 aa20.77■□□□□ 0.92
SREBF1-220ENST00000581707 AVPR1AP37288 418 aa20.77■□□□□ 0.92
SREBF1-220ENST00000581707 MCCD1P59942 119 aaPredicted RBP20.77■□□□□ 0.92
SREBF1-220ENST00000581707 ANKRD40Q6AI12 368 aa20.77■□□□□ 0.92
SREBF1-220ENST00000581707 SPOPLQ6IQ16 392 aa20.77■□□□□ 0.92
SREBF1-220ENST00000581707 ADSSL1Q8N142 457 aa20.77■□□□□ 0.92
SREBF1-220ENST00000581707 CELF5Q8N6W0 485 aaKnown RBP20.77■□□□□ 0.92
SREBF1-220ENST00000581707 TNIP3Q96KP6 325 aa20.77■□□□□ 0.92
SREBF1-220ENST00000581707 C8orf48Q96LL4 319 aa20.77■□□□□ 0.92
SREBF1-220ENST00000581707 B3GNT5Q9BYG0 378 aa20.77■□□□□ 0.92
SREBF1-220ENST00000581707 IMPG2Q9BZV3 1241 aa20.77■□□□□ 0.92
SREBF1-220ENST00000581707 ELOVL4Q9GZR5 314 aa20.77■□□□□ 0.92
SREBF1-220ENST00000581707 SMG9Q9H0W8 520 aaKnown RBP20.77■□□□□ 0.92
SREBF1-220ENST00000581707 LTB4R2Q9NPC1 389 aa20.77■□□□□ 0.92
SREBF1-220ENST00000581707 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.77■□□□□ 0.92
SREBF1-220ENST00000581707 FAM86C1Q9NVL1 165 aa20.77■□□□□ 0.92
SREBF1-220ENST00000581707 CHMP5Q9NZZ3 219 aa20.77■□□□□ 0.92
SREBF1-220ENST00000581707 MRPS17Q9Y2R5 130 aaKnown RBP20.77■□□□□ 0.92
SREBF1-220ENST00000581707 F8VP50 259 aa20.76■□□□□ 0.91
SREBF1-220ENST00000581707 ARNTLO00327 626 aa20.76■□□□□ 0.91
SREBF1-220ENST00000581707 CLDN5O00501 218 aa20.76■□□□□ 0.91
SREBF1-220ENST00000581707 MAN2B1O00754 1011 aa20.76■□□□□ 0.91
SREBF1-220ENST00000581707 LRRN2O75325 713 aa20.76■□□□□ 0.91
SREBF1-220ENST00000581707 TADA3O75528 432 aa20.76■□□□□ 0.91
SREBF1-220ENST00000581707 HOXD11P31277 338 aaPredicted RBP20.76■□□□□ 0.91
SREBF1-220ENST00000581707 FKBP3Q00688 224 aaKnown RBP20.76■□□□□ 0.91
SREBF1-220ENST00000581707 ARHGAP29Q52LW3 1261 aa20.76■□□□□ 0.91
SREBF1-220ENST00000581707 ISM2Q6H9L7 571 aa20.76■□□□□ 0.91
SREBF1-220ENST00000581707 BPIFB1Q8TDL5 484 aa20.76■□□□□ 0.91
SREBF1-220ENST00000581707 CSGALNACT1Q8TDX6 532 aa20.76■□□□□ 0.91
SREBF1-220ENST00000581707 TAS1R2Q8TE23 839 aa20.76■□□□□ 0.91
SREBF1-220ENST00000581707 PHOX2BQ99453 314 aa20.76■□□□□ 0.91
SREBF1-220ENST00000581707 ZNF518BQ9C0D4 1074 aa20.76■□□□□ 0.91
SREBF1-220ENST00000581707 TMEM8AQ9HCN3 771 aa20.76■□□□□ 0.91
SREBF1-220ENST00000581707 MAN1B1Q9UKM7 699 aa20.76■□□□□ 0.91
SREBF1-220ENST00000581707 ANAPC1Q9H1A4 1944 aa20.75■□□□□ 0.91
SREBF1-220ENST00000581707 SHISA7A6NL88 538 aa20.75■□□□□ 0.91
SREBF1-220ENST00000581707 GLULP15104 373 aa20.75■□□□□ 0.91
SREBF1-220ENST00000581707 ASPAP45381 313 aa20.75■□□□□ 0.91
SREBF1-220ENST00000581707 PMS1P54277 932 aaKnown RBP20.75■□□□□ 0.91
SREBF1-220ENST00000581707 LRRC63Q05C16 580 aa20.75■□□□□ 0.91
SREBF1-220ENST00000581707 STIM1Q13586 685 aa20.75■□□□□ 0.91
SREBF1-220ENST00000581707 ANGPT1Q15389 498 aa20.75■□□□□ 0.91
SREBF1-220ENST00000581707 DENND5BQ6ZUT9 1274 aa20.75■□□□□ 0.91
SREBF1-220ENST00000581707 ACOT1Q86TX2 421 aa20.75■□□□□ 0.91
SREBF1-220ENST00000581707 USP13Q92995 863 aaPredicted RBP20.75■□□□□ 0.91
SREBF1-220ENST00000581707 ZFYVE19Q96K21 471 aa20.75■□□□□ 0.91
SREBF1-220ENST00000581707 TDP1Q9NUW8 608 aa20.75■□□□□ 0.91
SREBF1-220ENST00000581707 THG1LQ9NWX6 298 aaKnown RBP20.75■□□□□ 0.91
SREBF1-220ENST00000581707 EHD2Q9NZN4 543 aa20.75■□□□□ 0.91
SREBF1-220ENST00000581707 PIAS3Q9Y6X2 628 aa20.75■□□□□ 0.91
SREBF1-220ENST00000581707 COL4A2P08572 1712 aa20.75■□□□□ 0.91
SREBF1-220ENST00000581707 ATP8B3O60423 1300 aa20.75■□□□□ 0.91
SREBF1-220ENST00000581707 NCAM2O15394 837 aa20.74■□□□□ 0.91
SREBF1-220ENST00000581707 STX10O60499 249 aa20.74■□□□□ 0.91
SREBF1-220ENST00000581707 TARSP26639 723 aaKnown RBP20.74■□□□□ 0.91
SREBF1-220ENST00000581707 NDST1P52848 882 aa20.74■□□□□ 0.91
SREBF1-220ENST00000581707 CACNA2D1P54289 1103 aa20.74■□□□□ 0.91
SREBF1-220ENST00000581707 MLLT6P55198 1093 aaPredicted RBP20.74■□□□□ 0.91
SREBF1-220ENST00000581707 NOP14P78316 857 aaKnown RBP20.74■□□□□ 0.91
SREBF1-220ENST00000581707 KRT39Q6A163 491 aa20.74■□□□□ 0.91
SREBF1-220ENST00000581707 ALYREFQ86V81 257 aaKnown RBP20.74■□□□□ 0.91
SREBF1-220ENST00000581707 UNC93AQ86WB7 457 aa20.74■□□□□ 0.91
SREBF1-220ENST00000581707 ZC3H3Q8IXZ2 948 aaKnown RBP20.74■□□□□ 0.91
SREBF1-220ENST00000581707 CCDC150Q8NCX0 1101 aa20.74■□□□□ 0.91
SREBF1-220ENST00000581707 DHTKD1Q96HY7 919 aaPredicted RBP20.74■□□□□ 0.91
SREBF1-220ENST00000581707 MED10Q9BTT4 135 aa20.74■□□□□ 0.91
SREBF1-220ENST00000581707 TTLL2Q9BWV7 592 aa20.74■□□□□ 0.91
SREBF1-220ENST00000581707 BCO2Q9BYV7 579 aa20.74■□□□□ 0.91
SREBF1-220ENST00000581707 APOBEC3GQ9HC16 384 aaKnown RBP20.74■□□□□ 0.91
SREBF1-220ENST00000581707 TRPC7Q9HCX4 862 aa20.74■□□□□ 0.91
SREBF1-220ENST00000581707 TMEM30AQ9NV96 361 aa20.74■□□□□ 0.91
SREBF1-220ENST00000581707 CCL26Q9Y258 94 aa20.74■□□□□ 0.91
SREBF1-220ENST00000581707 CACNA1IQ9P0X4 2223 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms