RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 PLD1Q13393 1074 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 WDR72Q3MJ13 1102 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 INTS6LQ5JSJ4 861 aaKnown RBP10.39□□□□□ -0.75
TOP3A-211ENST00000581536 TDRD10Q5VZ19 366 aaKnown RBP10.39□□□□□ -0.75
TOP3A-211ENST00000581536 CEP135Q66GS9 1140 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 FAM171BQ6P995 826 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 VITQ6UXI7 678 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 DPH6Q7L8W6 267 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 SLC9A9Q8IVB4 645 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 ZSCAN18Q8TBC5 510 aaPredicted RBP10.39□□□□□ -0.75
TOP3A-211ENST00000581536 SPPL2BQ8TCT7 592 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 ELSPBP1Q96BH3 223 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 XYLT2Q9H1B5 865 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 ATXN3LQ9H3M9 355 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 DPEP3Q9H4B8 488 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 ZFP14Q9HCL3 533 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 CRTAC1Q9NQ79 661 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.39□□□□□ -0.75
TOP3A-211ENST00000581536 FAM86C1Q9NVL1 165 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 HSFX1Q9UBD0 423 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 NXF1Q9UBU9 619 aaKnown RBP10.39□□□□□ -0.75
TOP3A-211ENST00000581536 MAGED2Q9UNF1 606 aaPredicted RBP10.39□□□□□ -0.75
TOP3A-211ENST00000581536 R3HCC1Q9Y3T6 440 aaKnown RBP10.39□□□□□ -0.75
TOP3A-211ENST00000581536 ASB3Q9Y575 518 aa10.39□□□□□ -0.75
TOP3A-211ENST00000581536 MYOFQ9NZM1 2061 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 GOLGA6L4A6NEF3 574 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 SHISA7A6NL88 538 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 HEPACAM2A8MVW5 462 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 CALUO43852 315 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-211ENST00000581536 PHACTR2O75167 634 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 F11P03951 625 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 GLULP15104 373 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 AOC1P19801 751 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 WARSP23381 471 aaKnown RBP10.38□□□□□ -0.75
TOP3A-211ENST00000581536 CTHP32929 405 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 PRCPP42785 496 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 RAP1GAPP47736 663 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 CLDN10P78369 228 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 TSPY1Q01534 308 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 TRPC3Q13507 836 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 KCNB1Q14721 858 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 GPR158Q5T848 1215 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 TMEM150AQ86TG1 271 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 ALYREFQ86V81 257 aaKnown RBP10.38□□□□□ -0.75
TOP3A-211ENST00000581536 ARID3BQ8IVW6 561 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-211ENST00000581536 OR6B3Q8NGW1 331 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 GOLGA5Q8TBA6 731 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 C2orf15Q8WU43 125 aaKnown RBP10.38□□□□□ -0.75
TOP3A-211ENST00000581536 SMARCD2Q92925 531 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 SLC46A2Q9BY10 475 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 FOXQ1Q9C009 403 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 SMG9Q9H0W8 520 aaKnown RBP10.38□□□□□ -0.75
TOP3A-211ENST00000581536 SDCBP2Q9H190 292 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 SLITRK6Q9H5Y7 841 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 TBC1D17Q9HA65 648 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 ARHGEF3Q9NR81 526 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 HEBP1Q9NRV9 189 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 TRAF3IP3Q9Y228 551 aa10.38□□□□□ -0.75
TOP3A-211ENST00000581536 FRYLO94915 3013 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 SLC38A8A6NNN8 435 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 CLDN5O00501 218 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 AKAP3O75969 853 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 COL4A2P08572 1712 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 PTPN1P18031 435 aaKnown RBP10.37□□□□□ -0.75
TOP3A-211ENST00000581536 BDNFP23560 247 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 NR2F2P24468 414 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 GDI1P31150 447 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 CACNA2D1P54289 1103 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 STARD6P59095 220 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 CYP27A1Q02318 531 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 SMARCB1Q12824 385 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 ADAM9Q13443 819 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 BIRC3Q13489 604 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 NCOA4Q13772 614 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 MLF2Q15773 248 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-211ENST00000581536 NFE2Q16621 373 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-211ENST00000581536 MDH1BQ5I0G3 518 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 SPOPLQ6IQ16 392 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 SV2AQ7L0J3 742 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 ITIH5Q86UX2 942 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 SPATA2LQ8IUW3 424 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-211ENST00000581536 MFSD6LQ8IWD5 586 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 SCN4BQ8IWT1 228 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 GUF1Q8N442 669 aaKnown RBP10.37□□□□□ -0.75
TOP3A-211ENST00000581536 LEMD2Q8NC56 503 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 TTC8Q8TAM2 541 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 TMEM174Q8WUU8 243 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 CCDC47Q96A33 483 aaKnown RBP10.37□□□□□ -0.75
TOP3A-211ENST00000581536 CYP2S1Q96SQ9 504 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 SYT15Q9BQS2 421 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 TRMT61BQ9BVS5 477 aaKnown RBP10.37□□□□□ -0.75
TOP3A-211ENST00000581536 KCNH6Q9H252 994 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 SNX25Q9H3E2 840 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 SMYD3Q9H7B4 428 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 TMEM30AQ9NV96 361 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 MAGEC2Q9UBF1 373 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-211ENST00000581536 CDH9Q9ULB4 789 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 PCDHA5Q9Y5H7 936 aa10.37□□□□□ -0.75
TOP3A-211ENST00000581536 FAM170BA6NMN3 283 aa10.36□□□□□ -0.75
TOP3A-211ENST00000581536 TACC1O75410 805 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms