RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 PARD3BQ8TEW8 1205 aa9.07□□□□□ -0.96
SUPT4H1-206ENST00000581204 PANX2Q96RD6 677 aa9.07□□□□□ -0.96
SUPT4H1-206ENST00000581204 BAG1Q99933 345 aaPredicted RBP9.07□□□□□ -0.96
SUPT4H1-206ENST00000581204 IRX2Q9BZI1 471 aaPredicted RBP9.07□□□□□ -0.96
SUPT4H1-206ENST00000581204 CDT1Q9H211 546 aa9.07□□□□□ -0.96
SUPT4H1-206ENST00000581204 KCNF1Q9H3M0 494 aa9.07□□□□□ -0.96
SUPT4H1-206ENST00000581204 PDZD7Q9H5P4 517 aa9.07□□□□□ -0.96
SUPT4H1-206ENST00000581204 RPF1Q9H9Y2 349 aaKnown RBP9.07□□□□□ -0.96
SUPT4H1-206ENST00000581204 PTPRHQ9HD43 1115 aa9.07□□□□□ -0.96
SUPT4H1-206ENST00000581204 ZNHIT6Q9NWK9 470 aaKnown RBP9.07□□□□□ -0.96
SUPT4H1-206ENST00000581204 CEP72Q9P209 647 aa9.07□□□□□ -0.96
SUPT4H1-206ENST00000581204 ZKSCAN5Q9Y2L8 839 aa9.07□□□□□ -0.96
SUPT4H1-206ENST00000581204 CDY2AQ9Y6F7 541 aa9.07□□□□□ -0.96
SUPT4H1-206ENST00000581204 FRYQ5TBA9 3013 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 A0A1B0GUA9 196 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 A0A1W2PQJ5 194 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 DCDC2BA2VCK2 349 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 ZZEF1O43149 2961 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 STAG3L1P0CL83 205 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 SLC9A1P19634 815 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 AXLP30530 894 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 SOX18P35713 384 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 TNFSF9P41273 254 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 ATXN1P54253 815 aaKnown RBP9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 POLR2FP61218 127 aaKnown RBP9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 ZBED6P86452 979 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 PPP3CAQ08209 521 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 BIRC3Q13489 604 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 DCAF4L1Q3SXM0 396 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 CBWD6Q4V339 395 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 CBWD3Q5JTY5 395 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 CBWD5Q5RIA9 395 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 KRT39Q6A163 491 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 NOTUMQ6P988 496 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 CRELD2Q6UXH1 353 aaPredicted RBP9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 RRAGAQ7L523 313 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 BRSK2Q8IWQ3 736 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 PLEKHO2Q8TD55 490 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 CGRRF1Q99675 332 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 CCDC94Q9BW85 323 aaPredicted RBP9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 GSX2Q9BZM3 304 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 EDEM3Q9BZQ6 932 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 TRIM6Q9C030 488 aaPredicted RBP9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 TMEM117Q9H0C3 514 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 INTS2Q9H0H0 1204 aaKnown RBP9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 SEMA4AQ9H3S1 761 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 C12orf49Q9H741 205 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 TMEM8AQ9HCN3 771 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 PDE11AQ9HCR9 933 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 NLRC4Q9NPP4 1024 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 TOPORSQ9NS56 1045 aaPredicted RBP9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 ABHD10Q9NUJ1 306 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 AGPAT5Q9NUQ2 364 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 PIN4Q9Y237 131 aaKnown RBP9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 R4GN57 208 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 FAM208BQ5VWN6 2430 aa9.06□□□□□ -0.96
SUPT4H1-206ENST00000581204 FANCMQ8IYD8 2048 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 SPTBN2O15020 2390 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 RNF225M0QZC1 329 aaPredicted RBP9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 ABLIM1O14639 778 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 EPHB6O15197 1021 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 RPS6KA5O75582 802 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 IL18RAPO95256 599 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 MAP3K6O95382 1288 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 NPTXRO95502 500 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 CLTAP09496 248 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 PIK3CAP42336 1068 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 AP3M2P53677 418 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 CCZ1BP86790 482 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 CCZ1P86791 482 aaPredicted RBP9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 NFX1Q12986 1120 aaKnown RBP9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 RAPGEF1Q13905 1077 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 UBAP2LQ14157 1087 aaKnown RBP9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 C1orf220Q5T0J3 134 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 KLHDC7AQ5VTJ3 777 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 LMBRD2Q68DH5 695 aaPredicted RBP9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 SLC27A1Q6PCB7 646 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 TRIM65Q6PJ69 517 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 TMEM40Q8WWA1 233 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 ACAP3Q96P50 834 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 SPAG5Q96R06 1193 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 DNAJC7Q99615 494 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 NAA15Q9BXJ9 866 aaKnown RBP9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 TTYH3Q9C0H2 523 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 S1PR5Q9H228 398 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 PLCB1Q9NQ66 1216 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 NDFIP2Q9NV92 336 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 CPSF3Q9UKF6 684 aaKnown RBP9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 PLAGL2Q9UPG8 496 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 SORCS3Q9UPU3 1222 aa9.05□□□□□ -0.96
SUPT4H1-206ENST00000581204 FASNP49327 2511 aaKnown RBP9.04□□□□□ -0.96
SUPT4H1-206ENST00000581204 SETXQ7Z333 2677 aaKnown RBP9.04□□□□□ -0.96
SUPT4H1-206ENST00000581204 CITO14578 2027 aa9.04□□□□□ -0.96
SUPT4H1-206ENST00000581204 LRRC53A6NM62 1247 aa9.04□□□□□ -0.96
SUPT4H1-206ENST00000581204 PMM2O15305 246 aa9.04□□□□□ -0.96
SUPT4H1-206ENST00000581204 FAM189A1O60320 539 aa9.04□□□□□ -0.96
SUPT4H1-206ENST00000581204 NOL4O94818 638 aa9.04□□□□□ -0.96
SUPT4H1-206ENST00000581204 TNNC2P02585 160 aa9.04□□□□□ -0.96
SUPT4H1-206ENST00000581204 CHRNA1P02708 482 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms