RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 SMARCD1Q96GM5 515 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 SPAG5Q96R06 1193 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 SEPT5Q99719 369 aaPredicted RBP16.02■□□□□ 0.16
MKS1-210ENST00000581180 MED10Q9BTT4 135 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 TRIM5Q9C035 493 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 COG5Q9UP83 839 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 MYO16Q9Y6X6 1858 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 ATP8B3O60423 1300 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 CCL16O15467 120 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 AP1G2O75843 785 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 LRG1P02750 347 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 BRD2P25440 801 aaKnown RBP16.01■□□□□ 0.15
MKS1-210ENST00000581180 ADORA2BP29275 332 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 GNA15P30679 374 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 SOX5P35711 763 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 STAT1P42224 750 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 CNGA2Q16280 664 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 DDR2Q16832 855 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 PKDCCQ504Y2 493 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 RARS2Q5T160 578 aaKnown RBP16.01■□□□□ 0.15
MKS1-210ENST00000581180 LCLAT1Q6UWP7 414 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 TMC5Q6UXY8 1006 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 GPR149Q86SP6 731 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 SLC47A2Q86VL8 602 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 SMRP1Q8NCR6 262 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 ZNF606Q8WXB4 792 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 C8orf48Q96LL4 319 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 SMOQ99835 787 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 DUSP16Q9BY84 665 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 ADAM7Q9H2U9 754 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 CSNK1G1Q9HCP0 422 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 PRDM6Q9NQX0 595 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 CD207Q9UJ71 328 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 TSPAN16Q9UKR8 245 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 MYO6Q9UM54 1294 aa16.01■□□□□ 0.15
MKS1-210ENST00000581180 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.01■□□□□ 0.15
MKS1-210ENST00000581180 A0A1W2PQJ5 194 aa16■□□□□ 0.15
MKS1-210ENST00000581180 F8VP50 259 aa16■□□□□ 0.15
MKS1-210ENST00000581180 H3BQ06 376 aaPredicted RBP16■□□□□ 0.15
MKS1-210ENST00000581180 TRIM66O15016 1216 aa16■□□□□ 0.15
MKS1-210ENST00000581180 BEST1O76090 585 aa16■□□□□ 0.15
MKS1-210ENST00000581180 FAM200BP0CF97 657 aa16■□□□□ 0.15
MKS1-210ENST00000581180 KCNA5P22460 613 aa16■□□□□ 0.15
MKS1-210ENST00000581180 GRIK1P39086 918 aa16■□□□□ 0.15
MKS1-210ENST00000581180 ALDH1A3P47895 512 aa16■□□□□ 0.15
MKS1-210ENST00000581180 ZNF75DP51815 510 aa16■□□□□ 0.15
MKS1-210ENST00000581180 RPL10AP62906 217 aaKnown RBP16■□□□□ 0.15
MKS1-210ENST00000581180 PTK2Q05397 1052 aa16■□□□□ 0.15
MKS1-210ENST00000581180 ITIH3Q06033 890 aa16■□□□□ 0.15
MKS1-210ENST00000581180 PLD1Q13393 1074 aa16■□□□□ 0.15
MKS1-210ENST00000581180 STILQ15468 1287 aa16■□□□□ 0.15
MKS1-210ENST00000581180 GOLGA7BQ2TAP0 167 aa16■□□□□ 0.15
MKS1-210ENST00000581180 SDHAF4Q5VUM1 108 aa16■□□□□ 0.15
MKS1-210ENST00000581180 SPECC1LQ69YQ0 1117 aa16■□□□□ 0.15
MKS1-210ENST00000581180 CYP26C1Q6V0L0 522 aa16■□□□□ 0.15
MKS1-210ENST00000581180 CLEC20AQ6ZU45 233 aa16■□□□□ 0.15
MKS1-210ENST00000581180 CACNA2D4Q7Z3S7 1137 aa16■□□□□ 0.15
MKS1-210ENST00000581180 TTC30AQ86WT1 665 aa16■□□□□ 0.15
MKS1-210ENST00000581180 SCN4BQ8IWT1 228 aa16■□□□□ 0.15
MKS1-210ENST00000581180 ANKRD52Q8NB46 1076 aa16■□□□□ 0.15
MKS1-210ENST00000581180 IQCDQ96DY2 449 aa16■□□□□ 0.15
MKS1-210ENST00000581180 SPATA17Q96L03 361 aa16■□□□□ 0.15
MKS1-210ENST00000581180 CEP295NLQ96MC4 621 aa16■□□□□ 0.15
MKS1-210ENST00000581180 KCNK16Q96T55 309 aa16■□□□□ 0.15
MKS1-210ENST00000581180 APOL5Q9BWW9 433 aa16■□□□□ 0.15
MKS1-210ENST00000581180 DMAP1Q9NPF5 467 aaPredicted RBP16■□□□□ 0.15
MKS1-210ENST00000581180 KRT82Q9NSB4 513 aa16■□□□□ 0.15
MKS1-210ENST00000581180 SPDYE4A6NLX3 237 aa15.99■□□□□ 0.15
MKS1-210ENST00000581180 GFPT2O94808 682 aa15.99■□□□□ 0.15
MKS1-210ENST00000581180 GYPCP04921 128 aa15.99■□□□□ 0.15
MKS1-210ENST00000581180 NPR3P17342 541 aa15.99■□□□□ 0.15
MKS1-210ENST00000581180 EPHB3P54753 998 aa15.99■□□□□ 0.15
MKS1-210ENST00000581180 BPIFB4P59827 614 aa15.99■□□□□ 0.15
MKS1-210ENST00000581180 MEA1Q16626 185 aa15.99■□□□□ 0.15
MKS1-210ENST00000581180 DDX1Q92499 740 aaKnown RBP15.99■□□□□ 0.15
MKS1-210ENST00000581180 SUSD6Q92537 303 aa15.99■□□□□ 0.15
MKS1-210ENST00000581180 SMG7Q92540 1137 aaKnown RBP15.99■□□□□ 0.15
MKS1-210ENST00000581180 PSMG2Q969U7 264 aa15.99■□□□□ 0.15
MKS1-210ENST00000581180 MRFAP1L1Q96HT8 127 aa15.99■□□□□ 0.15
MKS1-210ENST00000581180 LRRC3Q9BY71 257 aa15.99■□□□□ 0.15
MKS1-210ENST00000581180 CDH22Q9UJ99 828 aa15.99■□□□□ 0.15
MKS1-210ENST00000581180 CAPN11Q9UMQ6 739 aa15.99■□□□□ 0.15
MKS1-210ENST00000581180 ASB3Q9Y575 518 aa15.99■□□□□ 0.15
MKS1-210ENST00000581180 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.99■□□□□ 0.154e-7■□□□□ 9.6
MKS1-210ENST00000581180 LRRC53A6NM62 1247 aa15.98■□□□□ 0.15
MKS1-210ENST00000581180 HHLA1C9JL84 531 aa15.98■□□□□ 0.15
MKS1-210ENST00000581180 TNFRSF10BO14763 440 aa15.98■□□□□ 0.15
MKS1-210ENST00000581180 THAP12O43422 761 aa15.98■□□□□ 0.15
MKS1-210ENST00000581180 XYLBO75191 536 aa15.98■□□□□ 0.15
MKS1-210ENST00000581180 MICAL2O94851 1124 aa15.98■□□□□ 0.15
MKS1-210ENST00000581180 CFHP08603 1231 aa15.98■□□□□ 0.15
MKS1-210ENST00000581180 CYP11B1P15538 503 aa15.98■□□□□ 0.15
MKS1-210ENST00000581180 HMGA1P17096 107 aaKnown RBP15.98■□□□□ 0.15
MKS1-210ENST00000581180 BCAT1P54687 386 aa15.98■□□□□ 0.15
MKS1-210ENST00000581180 MAP3K7CLP57077 242 aa15.98■□□□□ 0.15
MKS1-210ENST00000581180 CLUL1Q15846 466 aa15.98■□□□□ 0.15
MKS1-210ENST00000581180 LEXMQ3ZCV2 418 aa15.98■□□□□ 0.15
MKS1-210ENST00000581180 E4F1Q66K89 784 aaPredicted RBP15.98■□□□□ 0.15
MKS1-210ENST00000581180 IRF2BP2Q7Z5L9 587 aa15.98■□□□□ 0.15
MKS1-210ENST00000581180 DNAJB7Q7Z6W7 309 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms