RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-218ENST00000580745 TGM1P22735 817 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 DDX6P26196 483 aaKnown RBP eCLIP11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 GNL1P36915 607 aaPredicted RBP11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 GRIK1P39086 918 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 RAP1GAPP47736 663 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 CDH8P55286 799 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 ZXDBP98169 803 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 PLCB2Q00722 1185 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 KNOP1Q1ED39 458 aaKnown RBP11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 WDR72Q3MJ13 1102 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 KMT5BQ4FZB7 885 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 PRR23BQ6ZRT6 265 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 DPH6Q7L8W6 267 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 HS2ST1Q7LGA3 356 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 OR6B3Q8NGW1 331 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 SPATA18Q8TC71 538 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 TRMT2BQ96GJ1 504 aaKnown RBP11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 MSANTD3Q96H12 275 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 FUBP3Q96I24 572 aaKnown RBP eCLIP11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 ZNF518BQ9C0D4 1074 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 XYLT2Q9H1B5 865 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 LINC00597Q9H2U6 94 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 SMYD3Q9H7B4 428 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 MAGEF1Q9HAY2 307 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 PARD6AQ9NPB6 346 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 GCNT4Q9P109 453 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 SCN1AP35498 2009 aa11.89□□□□□ -0.51
PPP4R1-218ENST00000580745 MYH11P35749 1972 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 UBE4BO95155 1302 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 LRRIQ3A6PVS8 624 aaPredicted RBP11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 F8VP50 259 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 CKMP06732 381 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 SLFN14P0C7P3 912 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 PFKFB1P16118 471 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 MAGEA11P43364 429 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 GALK1P51570 392 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 DLG4P78352 724 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 FAM160A1Q05DH4 1040 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 MTF1Q14872 753 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 ZNF77Q15935 545 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 RSPO4Q2I0M5 234 aaPredicted RBP11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 DGKKQ5KSL6 1271 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 TDRD10Q5VZ19 366 aaKnown RBP11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 CC2D1AQ6P1N0 951 aaPredicted RBP11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 SCARA5Q6ZMJ2 495 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 C4orf50Q6ZRC1 276 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 CEP57L1Q8IYX8 460 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 MYCBPAPQ8TBZ2 947 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 SH3RF2Q8TEC5 729 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 EZH1Q92800 747 aaPredicted RBP11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 B3GNT5Q9BYG0 378 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 SDCBP2Q9H190 292 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 SNX25Q9H3E2 840 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.88□□□□□ -0.514e-10■■■■■ 39.2
PPP4R1-218ENST00000580745 UXTQ9UBK9 157 aaPredicted RBP11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 CACNA1IQ9P0X4 2223 aa11.88□□□□□ -0.51
PPP4R1-218ENST00000580745 EP300Q09472 2414 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 TRAV19A0A0A6YYK7 116 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 MED19A0JLT2 244 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 A8MXQ7 604 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 PHACTR2O75167 634 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 TACC1O75410 805 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 CLSTN1O94985 981 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 VNN1O95497 513 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 USP17L7P0C7H9 530 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 PTPN1P18031 435 aaKnown RBP11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 HDCP19113 662 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 GJA4P35212 333 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 TNNC1P63316 161 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 SPEM2Q0P670 501 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 IFRD2Q12894 506 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 USP4Q13107 963 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 ORC1Q13415 861 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 BIRC3Q13489 604 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 TRPC3Q13507 836 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 ZNF268Q14587 947 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 TMEM196Q5HYL7 178 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 C1orf228Q6PIY5 440 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 VSTM1Q6UX27 236 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 DENND5BQ6ZUT9 1274 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 C12orf56Q8IXR9 622 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 OSCP1Q8WVF1 389 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 SPATA17Q96L03 361 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 IER2Q9BTL4 223 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 FAM126AQ9BYI3 521 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 ECT2Q9H8V3 914 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 KIF9Q9HAQ2 790 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 EXOC1Q9NV70 894 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 DMAC2Q9NW81 257 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 DUS2Q9NX74 493 aaKnown RBP11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 SMPD4Q9NXE4 827 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 ZMYM5Q9UJ78 669 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 CFAP45Q9UL16 551 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 USP18Q9UMW8 372 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 FAM186AA6NE01 2351 aa11.87□□□□□ -0.51
PPP4R1-218ENST00000580745 TRDMT1O14717 391 aaKnown RBP11.86□□□□□ -0.51
PPP4R1-218ENST00000580745 RNF40O75150 1001 aa11.86□□□□□ -0.51
PPP4R1-218ENST00000580745 ABL1P00519 1130 aa11.86□□□□□ -0.51
PPP4R1-218ENST00000580745 C4BPAP04003 597 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms