RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 CCDC170Q8IYT3 715 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 C12orf29Q8N999 325 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 KREMEN2Q8NCW0 462 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 IPO4Q8TEX9 1081 aaKnown RBP12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 C8orf48Q96LL4 319 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 CCDC42Q96M95 316 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 PGLYRP2Q96PD5 576 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 SEPT5Q99719 369 aaPredicted RBP12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 AGPAT1Q99943 283 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 DUSP16Q9BY84 665 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 LHX5Q9H2C1 402 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 TTYH1Q9H313 450 aaPredicted RBP12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 HAUS4Q9H6D7 363 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 CYLDQ9NQC7 956 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 FBXW11Q9UKB1 542 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 ASB3Q9Y575 518 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 VWA8A3KMH1 1905 aa12.44□□□□□ -0.42
SNORD3C-201ENST00000580533 COL4A4P53420 1690 aaPredicted RBP12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 EPOPA6NHQ4 379 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 XPO1O14980 1071 aaKnown RBP12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 AKR1B10O60218 316 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 XYLBO75191 536 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 MICAL2O94851 1124 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 HNRNPA1P09651 372 aaKnown RBP eCLIP12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 OR4Q2P0C623 313 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 PNMA6AP0CW24 399 aaPredicted RBP12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 CCDC130P13994 396 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 IGFBP4P22692 258 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 BDNFP23560 247 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 HOXA9P31269 272 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 CYLC1P35663 651 aaPredicted RBP12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 ACADSBP45954 432 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 NSFP46459 744 aaKnown RBP12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 NRIP1P48552 1158 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 GRIN2CQ14957 1233 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 PPM1LQ5SGD2 360 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 RNF19BQ6ZMZ0 732 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 NOP9Q86U38 636 aaKnown RBP12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 LRRTM3Q86VH5 581 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 FUKQ8N0W3 1084 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 TC2NQ8N9U0 490 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 STK32AQ8WU08 396 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 TRIM11Q96F44 468 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 SPATA17Q96L03 361 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 TMEM209Q96SK2 561 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 BAG1Q99933 345 aaPredicted RBP12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 B3GNT5Q9BYG0 378 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 SYNCQ9H7C4 482 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 COMMD8Q9NX08 183 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 ZDHHC7Q9NXF8 308 aa12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 NOCTQ9UK39 431 aaKnown RBP12.43□□□□□ -0.42
SNORD3C-201ENST00000580533 SOX1O00570 391 aaPredicted RBP12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 SART1O43290 800 aaKnown RBP12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 HCRTO43612 131 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 RTN3O95197 1032 aaPredicted RBP12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 FGF19O95750 216 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 C8AP07357 584 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 POU2F2P09086 479 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 CSH1P0DML2 217 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 CSH2P0DML3 217 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 HAPLN1P10915 354 aaPredicted RBP12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 DUSP4Q13115 394 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 SPA17Q15506 151 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 C10orf76Q5T2E6 689 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 TAF3Q5VWG9 929 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 LILRA6Q6PI73 481 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 RSPO2Q6UXX9 243 aaPredicted RBP12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 RBM23Q86U06 439 aaKnown RBP12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 SCN4BQ8IWT1 228 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 EFHBQ8N7U6 833 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 ATAD1Q8NBU5 361 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 LEMD2Q8NC56 503 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 LRCH3Q96II8 777 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 HSFY1Q96LI6 401 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 TRIM62Q9BVG3 475 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 FBXO44Q9H4M3 255 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 SFXN1Q9H9B4 322 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 CSNK1G1Q9HCP0 422 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 MAN1C1Q9NR34 630 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 SPTLC3Q9NUV7 552 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 UXTQ9UBK9 157 aaPredicted RBP12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 STRIP2Q9ULQ0 834 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 NME7Q9Y5B8 376 aa12.42□□□□□ -0.42
SNORD3C-201ENST00000580533 RFXAPO00287 272 aa12.41□□□□□ -0.42
SNORD3C-201ENST00000580533 ADAM12O43184 909 aa12.41□□□□□ -0.42
SNORD3C-201ENST00000580533 FBXO21O94952 628 aa12.41□□□□□ -0.42
SNORD3C-201ENST00000580533 MMEP08473 750 aa12.41□□□□□ -0.42
SNORD3C-201ENST00000580533 GZMAP12544 262 aa12.41□□□□□ -0.42
SNORD3C-201ENST00000580533 HOXB8P17481 243 aaPredicted RBP12.41□□□□□ -0.42
SNORD3C-201ENST00000580533 CYP2F1P24903 491 aa12.41□□□□□ -0.42
SNORD3C-201ENST00000580533 PLA2G4AP47712 749 aa12.41□□□□□ -0.42
SNORD3C-201ENST00000580533 MAP3K7CLP57077 242 aa12.41□□□□□ -0.42
SNORD3C-201ENST00000580533 TCEAL5Q5H9L2 206 aa12.41□□□□□ -0.42
SNORD3C-201ENST00000580533 CLEC20AQ6ZU45 233 aa12.41□□□□□ -0.42
SNORD3C-201ENST00000580533 DENND5BQ6ZUT9 1274 aa12.41□□□□□ -0.42
SNORD3C-201ENST00000580533 CCDC186Q7Z3E2 898 aa12.41□□□□□ -0.42
SNORD3C-201ENST00000580533 ZDHHC17Q8IUH5 632 aa12.41□□□□□ -0.42
SNORD3C-201ENST00000580533 SIX6OS1Q8N1H7 587 aa12.41□□□□□ -0.42
SNORD3C-201ENST00000580533 DEFB123Q8N688 67 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms