RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 TEAD2Q15562 447 aa26.52■■□□□ 1.84
CDC42EP4-205ENST00000580315 C1orf220Q5T0J3 134 aa26.52■■□□□ 1.84
CDC42EP4-205ENST00000580315 PATJQ8NI35 1801 aa26.52■■□□□ 1.84
CDC42EP4-205ENST00000580315 SHKBP1Q8TBC3 707 aa26.52■■□□□ 1.84
CDC42EP4-205ENST00000580315 DHTKD1Q96HY7 919 aaPredicted RBP26.52■■□□□ 1.84
CDC42EP4-205ENST00000580315 GCNAQ96QF7 691 aa26.52■■□□□ 1.84
CDC42EP4-205ENST00000580315 MAGEC2Q9UBF1 373 aaPredicted RBP26.52■■□□□ 1.84
CDC42EP4-205ENST00000580315 NCOR2Q9Y618 2525 aa26.52■■□□□ 1.84
CDC42EP4-205ENST00000580315 A8MXQ7 604 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 NRG2O14511 850 aaPredicted RBP26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 SLC16A3O15427 465 aaKnown RBP26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 STX10O60499 249 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 ATP2C2O75185 946 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 MOSPD3O75425 235 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 GJA1P17302 382 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 CYP2F1P24903 491 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 GABRR2P28476 465 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 GTF2H1P32780 548 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 GCLMP48507 274 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 ARHGAP15Q53QZ3 475 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 ANKRD40Q6AI12 368 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 TSSK4Q6SA08 328 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 EEF2KMTQ96G04 330 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 ASB16Q96NS5 453 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 ATXN3LQ9H3M9 355 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 BRD9Q9H8M2 597 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 ZNF334Q9HCZ1 680 aaPredicted RBP26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 NCDNQ9UBB6 729 aa26.51■■□□□ 1.83
CDC42EP4-205ENST00000580315 LILRB5O75023 590 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 HLA-DRAP01903 254 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 CSH1P0DML2 217 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 CSH2P0DML3 217 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 CCNE1P24864 410 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 CDC25CP30307 473 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 MAGEA11P43364 429 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 MTAPQ13126 283 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 ZNF687Q8N1G0 1237 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 CCDC150Q8NCX0 1101 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 MYCBPAPQ8TBZ2 947 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 SMARCD2Q92925 531 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 MYLPFQ96A32 169 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 ZSWIM3Q96MP5 696 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 TRMT61BQ9BVS5 477 aaKnown RBP26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 MMRN2Q9H8L6 949 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 TMEM8AQ9HCN3 771 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 CRTAC1Q9NQ79 661 aa26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 PRMT8Q9NR22 394 aaPredicted RBP26.5■■□□□ 1.83
CDC42EP4-205ENST00000580315 F5P12259 2224 aa26.49■■□□□ 1.83
CDC42EP4-205ENST00000580315 ASS1P00966 412 aaKnown RBP26.49■■□□□ 1.83
CDC42EP4-205ENST00000580315 CYP27A1Q02318 531 aa26.49■■□□□ 1.83
CDC42EP4-205ENST00000580315 PPP3CAQ08209 521 aa26.49■■□□□ 1.83
CDC42EP4-205ENST00000580315 MORC3Q14149 939 aa26.49■■□□□ 1.83
CDC42EP4-205ENST00000580315 DDR2Q16832 855 aa26.49■■□□□ 1.83
CDC42EP4-205ENST00000580315 CCDC142Q17RM4 750 aa26.49■■□□□ 1.83
CDC42EP4-205ENST00000580315 VSTM1Q6UX27 236 aa26.49■■□□□ 1.83
CDC42EP4-205ENST00000580315 SCARA5Q6ZMJ2 495 aa26.49■■□□□ 1.83
CDC42EP4-205ENST00000580315 SCN4BQ8IWT1 228 aa26.49■■□□□ 1.83
CDC42EP4-205ENST00000580315 ZC3H3Q8IXZ2 948 aaKnown RBP26.49■■□□□ 1.83
CDC42EP4-205ENST00000580315 EPC1Q9H2F5 836 aa26.49■■□□□ 1.83
CDC42EP4-205ENST00000580315 SMYD3Q9H7B4 428 aa26.49■■□□□ 1.83
CDC42EP4-205ENST00000580315 BIN1O00499 593 aa26.48■■□□□ 1.83
CDC42EP4-205ENST00000580315 MAN2B1O00754 1011 aa26.48■■□□□ 1.83
CDC42EP4-205ENST00000580315 PTPN1P18031 435 aaKnown RBP26.48■■□□□ 1.83
CDC42EP4-205ENST00000580315 GPR15P49685 360 aa26.48■■□□□ 1.83
CDC42EP4-205ENST00000580315 PMS1P54277 932 aaKnown RBP26.48■■□□□ 1.83
CDC42EP4-205ENST00000580315 MCCD1P59942 119 aaPredicted RBP26.48■■□□□ 1.83
CDC42EP4-205ENST00000580315 RSPO4Q2I0M5 234 aaPredicted RBP26.48■■□□□ 1.83
CDC42EP4-205ENST00000580315 MDH1BQ5I0G3 518 aa26.48■■□□□ 1.83
CDC42EP4-205ENST00000580315 KRT39Q6A163 491 aa26.48■■□□□ 1.83
CDC42EP4-205ENST00000580315 GAREM2Q75VX8 874 aa26.48■■□□□ 1.83
CDC42EP4-205ENST00000580315 ZSCAN18Q8TBC5 510 aaPredicted RBP26.48■■□□□ 1.83
CDC42EP4-205ENST00000580315 IRF7Q92985 503 aa26.48■■□□□ 1.83
CDC42EP4-205ENST00000580315 NDRG2Q9UN36 371 aaKnown RBP26.48■■□□□ 1.83
CDC42EP4-205ENST00000580315 SMG5Q9UPR3 1016 aaKnown RBP26.48■■□□□ 1.83
CDC42EP4-205ENST00000580315 TRIM49BA6NDI0 452 aa26.47■■□□□ 1.83
CDC42EP4-205ENST00000580315 PSMC3P17980 439 aa26.47■■□□□ 1.83
CDC42EP4-205ENST00000580315 CDH8P55286 799 aa26.47■■□□□ 1.83
CDC42EP4-205ENST00000580315 KLHL10Q6JEL2 608 aa26.47■■□□□ 1.83
CDC42EP4-205ENST00000580315 VITQ6UXI7 678 aa26.47■■□□□ 1.83
CDC42EP4-205ENST00000580315 TAS1R2Q8TE23 839 aa26.47■■□□□ 1.83
CDC42EP4-205ENST00000580315 E2F7Q96AV8 911 aa26.47■■□□□ 1.83
CDC42EP4-205ENST00000580315 PCED1BQ96HM7 432 aa26.47■■□□□ 1.83
CDC42EP4-205ENST00000580315 TNIP3Q96KP6 325 aa26.47■■□□□ 1.83
CDC42EP4-205ENST00000580315 TRPV4Q9HBA0 871 aa26.47■■□□□ 1.83
CDC42EP4-205ENST00000580315 TRPV5Q9NQA5 729 aa26.47■■□□□ 1.83
CDC42EP4-205ENST00000580315 UXTQ9UBK9 157 aaPredicted RBP26.47■■□□□ 1.83
CDC42EP4-205ENST00000580315 ZMYM5Q9UJ78 669 aa26.47■■□□□ 1.83
CDC42EP4-205ENST00000580315 MAGED2Q9UNF1 606 aaPredicted RBP26.47■■□□□ 1.83
CDC42EP4-205ENST00000580315 BICDL2A1A5D9 508 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 CD44P16070 742 aaKnown RBP26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 TRIM21P19474 475 aaKnown RBP26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 BDNFP23560 247 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 ANXA13P27216 316 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 RAP1GAPP47736 663 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 MXI1P50539 228 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 CAMK4Q16566 473 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 GPR158Q5T848 1215 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 SDHAF4Q5VUM1 108 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 TCERG1LQ5VWI1 586 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 GPR161Q8N6U8 529 aaKnown RBP26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms