RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 TIGD5Q53EQ6 642 aa10.42□□□□□ -0.74
SNX11-206ENST00000580219 TCEAL5Q5H9L2 206 aa10.42□□□□□ -0.74
SNX11-206ENST00000580219 ZNF667Q5HYK9 610 aa10.42□□□□□ -0.74
SNX11-206ENST00000580219 JADE1Q6IE81 842 aa10.42□□□□□ -0.74
SNX11-206ENST00000580219 CATSPER4Q7RTX7 472 aa10.42□□□□□ -0.74
SNX11-206ENST00000580219 PHF13Q86YI8 300 aaPredicted RBP10.42□□□□□ -0.74
SNX11-206ENST00000580219 LURAP1LQ8IV03 231 aa10.42□□□□□ -0.74
SNX11-206ENST00000580219 MCOLN2Q8IZK6 566 aa10.42□□□□□ -0.74
SNX11-206ENST00000580219 C1orf127Q8N9H9 656 aa10.42□□□□□ -0.74
SNX11-206ENST00000580219 ZNF653Q96CK0 615 aa10.42□□□□□ -0.74
SNX11-206ENST00000580219 CPB2Q96IY4 423 aa10.42□□□□□ -0.74
SNX11-206ENST00000580219 RIPOR3Q96MK2 946 aa10.42□□□□□ -0.74
SNX11-206ENST00000580219 TGS1Q96RS0 853 aaKnown RBP10.42□□□□□ -0.74
SNX11-206ENST00000580219 NAP1L3Q99457 506 aaPredicted RBP10.42□□□□□ -0.74
SNX11-206ENST00000580219 BCO2Q9BYV7 579 aa10.42□□□□□ -0.74
SNX11-206ENST00000580219 ZNF518BQ9C0D4 1074 aa10.42□□□□□ -0.74
SNX11-206ENST00000580219 FAM49AQ9H0Q0 323 aaPredicted RBP10.42□□□□□ -0.74
SNX11-206ENST00000580219 SIX4Q9UIU6 781 aa10.42□□□□□ -0.74
SNX11-206ENST00000580219 ANK1P16157 1881 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 NLRC5Q86WI3 1866 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 CCDC188H7C350 402 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 PGRMC1O00264 195 aaKnown RBP10.41□□□□□ -0.74
SNX11-206ENST00000580219 ZRANB2O95218 330 aaKnown RBP eCLIP10.41□□□□□ -0.74
SNX11-206ENST00000580219 NFICP08651 508 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 RHOXF2BP0C7M4 288 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 HOXA11P31270 313 aaPredicted RBP10.41□□□□□ -0.74
SNX11-206ENST00000580219 CXCR5P32302 372 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 LTBRP36941 435 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 ASPAP45381 313 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 CRYBB1P53674 252 aaPredicted RBP10.41□□□□□ -0.74
SNX11-206ENST00000580219 ATXN1P54253 815 aaKnown RBP10.41□□□□□ -0.74
SNX11-206ENST00000580219 YARSP54577 528 aaKnown RBP10.41□□□□□ -0.74
SNX11-206ENST00000580219 OSTNP61366 133 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 ERVK-21P61565 698 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 TNNC1P63316 161 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 NOMO3P69849 1222 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 RBP5P82980 135 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 COL19A1Q14993 1142 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 PPP2R5EQ16537 467 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 PTGISQ16647 500 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 LIN9Q5TKA1 542 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 CC2D1AQ6P1N0 951 aaPredicted RBP10.41□□□□□ -0.74
SNX11-206ENST00000580219 RUFY4Q6ZNE9 571 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 RPAINQ86UA6 219 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 DNAAF5Q86Y56 855 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 TMEM192Q8IY95 271 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 UBL4BQ8N7F7 174 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 CXorf38Q8TB03 319 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 ZNF564Q8TBZ8 553 aaPredicted RBP10.41□□□□□ -0.74
SNX11-206ENST00000580219 MRPL38Q96DV4 380 aaKnown RBP10.41□□□□□ -0.74
SNX11-206ENST00000580219 FAM84AQ96KN4 292 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 RHOXF2Q9BQY4 288 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 NUP85Q9BW27 656 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 MRPL47Q9HD33 250 aaKnown RBP10.41□□□□□ -0.74
SNX11-206ENST00000580219 ACP6Q9NPH0 428 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 CISHQ9NSE2 258 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 TRMT13Q9NUP7 481 aaKnown RBP10.41□□□□□ -0.74
SNX11-206ENST00000580219 CNOT8Q9UFF9 292 aaKnown RBP10.41□□□□□ -0.74
SNX11-206ENST00000580219 RABGEF1Q9UJ41 708 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 TMEM59LQ9UK28 342 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 PCDHGC3Q9UN70 934 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 ALG6Q9Y672 507 aa10.41□□□□□ -0.74
SNX11-206ENST00000580219 CCDC66A2RUB6 948 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 DDX3YO15523 660 aaKnown RBP10.4□□□□□ -0.74
SNX11-206ENST00000580219 MEFVO15553 781 aaPredicted RBP10.4□□□□□ -0.74
SNX11-206ENST00000580219 THAP12O43422 761 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 MED7O43513 233 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 CTNNA2P26232 953 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 TNFRSF8P28908 595 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 CDH5P33151 784 aaPredicted RBP10.4□□□□□ -0.74
SNX11-206ENST00000580219 SLC1A1P43005 524 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 C2orf54Q08AI8 447 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 PTK7Q13308 1070 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 SMAD4Q13485 552 aaKnown RBP10.4□□□□□ -0.74
SNX11-206ENST00000580219 MON1BQ7L1V2 547 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 TMCO2Q7Z6W1 182 aaPredicted RBP10.4□□□□□ -0.74
SNX11-206ENST00000580219 RSPH3Q86UC2 560 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 SERINC5Q86VE9 423 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 CDR2LQ86X02 465 aaPredicted RBP10.4□□□□□ -0.74
SNX11-206ENST00000580219 TMEM35BQ8NCS4 154 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 DNAJB3Q8WWF6 145 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 ZNF606Q8WXB4 792 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 WNT8BQ93098 351 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 PPP1R16BQ96T49 567 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 PNKPQ96T60 521 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 PSMB7Q99436 277 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 OSMRQ99650 979 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 TRPV6Q9H1D0 765 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 PACSIN2Q9UNF0 486 aaPredicted RBP10.4□□□□□ -0.74
SNX11-206ENST00000580219 NOD1Q9Y239 953 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 CEP83Q9Y592 693 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.4□□□□□ -0.74
SNX11-206ENST00000580219 SCINQ9Y6U3 715 aa10.4□□□□□ -0.74
SNX11-206ENST00000580219 ITPR1Q14643 2758 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 LOC730098B7Z3J9 87 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 M0QZ92 97 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 XPOTO43592 962 aaKnown RBP10.39□□□□□ -0.75
SNX11-206ENST00000580219 CEP104O60308 925 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 CSDE1O75534 798 aaKnown RBP10.39□□□□□ -0.75
SNX11-206ENST00000580219 CLSTN1O94985 981 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms