RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 NOL4O94818 638 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PFKLP17858 780 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 BCKDHBP21953 392 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 P2RY2P41231 377 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ATXN3P54252 364 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 KCNB1Q14721 858 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 C2orf27AQ580R0 203 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 NAIF1Q69YI7 327 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SLFN12LQ6IEE8 588 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SLC23A3Q6PIS1 610 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 RABEPKQ7Z6M1 372 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 EFCAB13Q8IY85 973 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 HDDC3Q8N4P3 179 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 MDGA1Q8NFP4 955 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 CEP76Q8TAP6 659 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ACBD6Q9BR61 282 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PI4K2AQ9BTU6 479 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PARVGQ9HBI0 331 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 POLMQ9NP87 494 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 WNT6Q9Y6F9 365 aa13.13□□□□□ -0.31
CDK5RAP3-216ENST00000579853 MYO18AQ92614 2054 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ASXL3Q9C0F0 2248 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 FAM221BA6H8Z2 402 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 MYMKA6NI61 221 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 K7EQS6 105 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TAF4O00268 1085 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SLC26A4O43511 780 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 FAM13AO94988 1023 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ENGP17813 658 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TOB1P50616 345 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 CDR1P51861 262 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SIM1P81133 766 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 MYL7Q01449 175 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 DDR2Q16832 855 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ZNF423Q2M1K9 1284 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 CFAP221Q4G0U5 840 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ADALQ6DHV7 355 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 KIAA1211LQ6NV74 962 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PIP4P1Q86T03 277 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TMEM86AQ8N2M4 240 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 MYCT1Q8N699 235 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TTC16Q8NEE8 873 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SPATA18Q8TC71 538 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SH3RF2Q8TEC5 729 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 FUBP3Q96I24 572 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 CYP2S1Q96SQ9 504 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ARHGAP26Q9UNA1 814 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 LIMCH1Q9UPQ0 1083 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 CFAP46Q8IYW2 2715 aa13.12□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PTPRDP23468 1912 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TRAK2O60296 914 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 HUS1O60921 280 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TADA3O75528 432 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 IL18RAPO95256 599 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 HDCP19113 662 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 OPRD1P41143 372 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 EIF2DP41214 584 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 MAPK8P45983 427 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ACOT2P49753 483 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ZNF131P52739 623 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SEC13P55735 322 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 GTF2BQ00403 316 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 GFPT1Q06210 699 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ST3GAL1Q11201 340 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SEMA3BQ13214 749 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 IL17AQ16552 155 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ARSHQ5FYA8 562 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 LYSMD4Q5XG99 296 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TTC30AQ86WT1 665 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 CCDC83Q8IWF9 413 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 CEP295NLQ96MC4 621 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PNMA5Q96PV4 448 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 REEP2Q9BRK0 252 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 EHD2Q9NZN4 543 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 BCCIPQ9P287 314 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 KLK13Q9UKR3 277 aa13.11□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ANAPC1Q9H1A4 1944 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PLXND1Q9Y4D7 1925 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SLC9A3R1O14745 358 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 AP5Z1O43299 807 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 OPHN1O60890 802 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 CYP2F1P24903 491 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PCSK1P29120 753 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 LHX1P48742 406 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 GPR15P49685 360 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ATP2C1P98194 919 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 POSTNQ15063 836 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 DUOXA1Q1HG43 343 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TMEM119Q4V9L6 283 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 RILPL1Q5EBL4 403 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 INTS6LQ5JSJ4 861 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 EOGTQ5NDL2 527 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PEAR1Q5VY43 1037 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ARL6IP4Q66PJ3 421 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 GPBP1Q86WP2 473 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PROSER1Q86XN7 944 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SPATA2LQ8IUW3 424 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TMEFF1Q8IYR6 380 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms