RNA–Protein interactions for RNA: ENST00000579755.1

CDKN2A-214, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2A, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-214ENST00000579755 AP3M2P53677 418 aa25.37■■□□□ 1.65
CDKN2A-214ENST00000579755 VSTM1Q6UX27 236 aa25.37■■□□□ 1.65
CDKN2A-214ENST00000579755 LIMS2Q7Z4I7 341 aa25.37■■□□□ 1.65
CDKN2A-214ENST00000579755 MON1AQ86VX9 555 aa25.37■■□□□ 1.65
CDKN2A-214ENST00000579755 MYLPFQ96A32 169 aa25.37■■□□□ 1.65
CDKN2A-214ENST00000579755 TRMT2BQ96GJ1 504 aaKnown RBP25.37■■□□□ 1.65
CDKN2A-214ENST00000579755 CHRDQ9H2X0 955 aa25.37■■□□□ 1.65
CDKN2A-214ENST00000579755 KIF9Q9HAQ2 790 aa25.37■■□□□ 1.65
CDKN2A-214ENST00000579755 TRPC7Q9HCX4 862 aa25.37■■□□□ 1.65
CDKN2A-214ENST00000579755 GKN1Q9NS71 199 aa25.37■■□□□ 1.65
CDKN2A-214ENST00000579755 TACC1O75410 805 aa25.36■■□□□ 1.65
CDKN2A-214ENST00000579755 BDNFP23560 247 aa25.36■■□□□ 1.65
CDKN2A-214ENST00000579755 MYL6P60660 151 aa25.36■■□□□ 1.65
CDKN2A-214ENST00000579755 CCDC142Q17RM4 750 aa25.36■■□□□ 1.65
CDKN2A-214ENST00000579755 ITPRIPL2Q3MIP1 535 aa25.36■■□□□ 1.65
CDKN2A-214ENST00000579755 TSSK4Q6SA08 328 aa25.36■■□□□ 1.65
CDKN2A-214ENST00000579755 TTC16Q8NEE8 873 aa25.36■■□□□ 1.65
CDKN2A-214ENST00000579755 ZNF516Q92618 1163 aa25.36■■□□□ 1.65
CDKN2A-214ENST00000579755 MYRFLQ96LU7 910 aa25.36■■□□□ 1.65
CDKN2A-214ENST00000579755 MRPL45Q9BRJ2 306 aaKnown RBP25.36■■□□□ 1.65
CDKN2A-214ENST00000579755 ANP32EQ9BTT0 268 aa25.36■■□□□ 1.65
CDKN2A-214ENST00000579755 CRTAC1Q9NQ79 661 aa25.36■■□□□ 1.65
CDKN2A-214ENST00000579755 ZSCAN32Q9NX65 697 aa25.36■■□□□ 1.65
CDKN2A-214ENST00000579755 PCDHGA2Q9Y5H1 932 aa25.36■■□□□ 1.65
CDKN2A-214ENST00000579755 RPN1P04843 607 aaKnown RBP25.35■■□□□ 1.65
CDKN2A-214ENST00000579755 CASP4P49662 377 aa25.35■■□□□ 1.65
CDKN2A-214ENST00000579755 CAVIN1Q6NZI2 390 aaKnown RBP25.35■■□□□ 1.65
CDKN2A-214ENST00000579755 ZNF687Q8N1G0 1237 aa25.35■■□□□ 1.65
CDKN2A-214ENST00000579755 KIAA0895Q8NCT3 520 aa25.35■■□□□ 1.65
CDKN2A-214ENST00000579755 MYCBPAPQ8TBZ2 947 aa25.35■■□□□ 1.65
CDKN2A-214ENST00000579755 USP13Q92995 863 aaPredicted RBP25.35■■□□□ 1.65
CDKN2A-214ENST00000579755 EHD2Q9NZN4 543 aa25.35■■□□□ 1.65
CDKN2A-214ENST00000579755 PATJQ8NI35 1801 aa25.35■■□□□ 1.65
CDKN2A-214ENST00000579755 ZNF638Q14966 1978 aaKnown RBP25.35■■□□□ 1.65
CDKN2A-214ENST00000579755 PTPRZ1P23471 2315 aaPredicted RBP25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 TRAV19A0A0A6YYK7 116 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 A8MXQ7 604 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 PDXKO00764 312 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 TRIM66O15016 1216 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 SMC2O95347 1197 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 USP17L7P0C7H9 530 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 CHRNB1P11230 501 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 CTHP32929 405 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 CCR3P51677 355 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 NRLP54845 237 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 TNK2Q07912 1038 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 MDH1BQ5I0G3 518 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 DGKKQ5KSL6 1271 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 PCED1BQ96HM7 432 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 FAM126AQ9BYI3 521 aaPredicted RBP25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 CCL26Q9Y258 94 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 FRMD4BQ9Y2L6 1034 aa25.34■■□□□ 1.65
CDKN2A-214ENST00000579755 CALUO43852 315 aaPredicted RBP25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 STAU1O95793 577 aaKnown RBP25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 CKMP06732 381 aa25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 COL4A2P08572 1712 aa25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 PTPN1P18031 435 aaKnown RBP25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 CXCL12P48061 93 aa25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 AMPD2Q01433 879 aa25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 PON2Q15165 354 aa25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 MAMSTRQ6ZN01 415 aa25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 DENND5BQ6ZUT9 1274 aa25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 SLC9A9Q8IVB4 645 aa25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 PARD3BQ8TEW8 1205 aa25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 SPATA17Q96L03 361 aa25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 CEP295NLQ96MC4 621 aa25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 TMEM63CQ9P1W3 806 aa25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 F5P12259 2224 aa25.33■■□□□ 1.65
CDKN2A-214ENST00000579755 DENND4CQ5VZ89 1909 aa25.32■■□□□ 1.64
CDKN2A-214ENST00000579755 NR3C1P04150 777 aa25.32■■□□□ 1.64
CDKN2A-214ENST00000579755 RUNX3Q13761 415 aa25.32■■□□□ 1.64
CDKN2A-214ENST00000579755 ZNF268Q14587 947 aaPredicted RBP25.32■■□□□ 1.64
CDKN2A-214ENST00000579755 ZNF699Q32M78 642 aa25.32■■□□□ 1.64
CDKN2A-214ENST00000579755 ZNF667Q5HYK9 610 aa25.32■■□□□ 1.64
CDKN2A-214ENST00000579755 CEP135Q66GS9 1140 aa25.32■■□□□ 1.64
CDKN2A-214ENST00000579755 RBM43Q6ZSC3 357 aaKnown RBP25.32■■□□□ 1.64
CDKN2A-214ENST00000579755 PRMT8Q9NR22 394 aaPredicted RBP25.32■■□□□ 1.64
CDKN2A-214ENST00000579755 DMAC2Q9NW81 257 aa25.32■■□□□ 1.64
CDKN2A-214ENST00000579755 TRPM5Q9NZQ8 1165 aa25.32■■□□□ 1.64
CDKN2A-214ENST00000579755 LRRIQ3A6PVS8 624 aaPredicted RBP25.31■■□□□ 1.64
CDKN2A-214ENST00000579755 PDE6CP51160 858 aa25.31■■□□□ 1.64
CDKN2A-214ENST00000579755 KCNB1Q14721 858 aa25.31■■□□□ 1.64
CDKN2A-214ENST00000579755 CAMK4Q16566 473 aa25.31■■□□□ 1.64
CDKN2A-214ENST00000579755 RUBCNQ92622 972 aa25.31■■□□□ 1.64
CDKN2A-214ENST00000579755 CYP2S1Q96SQ9 504 aa25.31■■□□□ 1.64
CDKN2A-214ENST00000579755 FAM83CQ9BQN1 747 aa25.31■■□□□ 1.64
CDKN2A-214ENST00000579755 GTPBP4Q9BZE4 634 aaKnown RBP25.31■■□□□ 1.64
CDKN2A-214ENST00000579755 KCTD10Q9H3F6 313 aa25.31■■□□□ 1.64
CDKN2A-214ENST00000579755 EBF3Q9H4W6 596 aa25.31■■□□□ 1.64
CDKN2A-214ENST00000579755 RBM12Q9NTZ6 932 aaKnown RBP25.31■■□□□ 1.64
CDKN2A-214ENST00000579755 P4HA1P13674 534 aa25.3■■□□□ 1.64
CDKN2A-214ENST00000579755 HDCP19113 662 aa25.3■■□□□ 1.64
CDKN2A-214ENST00000579755 DPYDQ12882 1025 aa25.3■■□□□ 1.64
CDKN2A-214ENST00000579755 NCOA4Q13772 614 aa25.3■■□□□ 1.64
CDKN2A-214ENST00000579755 PDGFRLQ15198 375 aa25.3■■□□□ 1.64
CDKN2A-214ENST00000579755 TDRD10Q5VZ19 366 aaKnown RBP25.3■■□□□ 1.64
CDKN2A-214ENST00000579755 TXNDC11Q6PKC3 985 aa25.3■■□□□ 1.64
CDKN2A-214ENST00000579755 SPEM1Q8N4L4 309 aa25.3■■□□□ 1.64
CDKN2A-214ENST00000579755 ZBTB44Q8NCP5 570 aa25.3■■□□□ 1.64
CDKN2A-214ENST00000579755 PLEKHO2Q8TD55 490 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms