RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 ANO10Q9NW15 660 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 HSPBP1Q9NZL4 362 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 ADD3Q9UEY8 706 aaKnown RBP6.94□□□□□ -1.3
COPS3-216ENST00000579716 RSPH14Q9UHP6 348 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 RCOR1Q9UKL0 485 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 SIK3Q9Y2K2 1263 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 YBX2Q9Y2T7 364 aaKnown RBP6.94□□□□□ -1.3
COPS3-216ENST00000579716 C15orf41Q9Y2V0 281 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 CARMIL1Q5VZK9 1371 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 GOLGA8SH3BPF8 625 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 STX16-NPEPL1H3BU86 382 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 PEX10O60683 326 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 TRIM13O60858 407 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 PEX11AO75192 247 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 PPM1BO75688 479 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 PIAS2O75928 621 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 PF4P02776 101 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 MYBP10242 640 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 HSPA8P11142 646 aaKnown RBP6.93□□□□□ -1.3
COPS3-216ENST00000579716 HPGDP15428 266 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 ALOX15P16050 662 aaPredicted RBP6.93□□□□□ -1.3
COPS3-216ENST00000579716 ENDOUP21128 410 aaKnown RBP6.93□□□□□ -1.3
COPS3-216ENST00000579716 RFC1P35251 1148 aaPredicted RBP6.93□□□□□ -1.3
COPS3-216ENST00000579716 RGS2P41220 211 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 HAAOP46952 286 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 MAPKAPK2P49137 400 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 ZNF165P49910 485 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 MAP3K7CLP57077 242 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 RPS26P62854 115 aaKnown RBP6.93□□□□□ -1.3
COPS3-216ENST00000579716 ARF5P84085 180 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 EGR3Q06889 387 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 ACTN3Q08043 901 aaPredicted RBP6.93□□□□□ -1.3
COPS3-216ENST00000579716 AIMP1Q12904 312 aaKnown RBP6.93□□□□□ -1.3
COPS3-216ENST00000579716 DOC2AQ14183 400 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 ERV3-1Q14264 604 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 FUT11Q495W5 492 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 AGMOQ6ZNB7 445 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 MICALCLQ6ZW33 695 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 SLFN11Q7Z7L1 901 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 ZNF605Q86T29 641 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 IRF2BP1Q8IU81 584 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 KRT78Q8N1N4 520 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 ARL14Q8N4G2 192 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 NIPA2Q8N8Q9 360 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 SMYD1Q8NB12 490 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 ZBTB34Q8NCN2 500 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 FAM13CQ8NE31 585 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 C1orf162Q8NEQ5 155 aaPredicted RBP6.93□□□□□ -1.3
COPS3-216ENST00000579716 PANK1Q8TE04 598 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 PTP4A1Q93096 173 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 SGK3Q96BR1 496 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 C19orf60Q96EN9 201 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 TMEM41AQ96HV5 264 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 MAELQ96JY0 434 aaKnown RBP6.93□□□□□ -1.3
COPS3-216ENST00000579716 TTC25Q96NG3 672 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 DDX50Q9BQ39 737 aaKnown RBP6.93□□□□□ -1.3
COPS3-216ENST00000579716 KRT23Q9C075 422 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 SENP6Q9GZR1 1112 aaPredicted RBP6.93□□□□□ -1.3
COPS3-216ENST00000579716 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.93□□□□□ -1.3
COPS3-216ENST00000579716 DENND2DQ9H6A0 471 aaPredicted RBP6.93□□□□□ -1.3
COPS3-216ENST00000579716 TASP1Q9H6P5 420 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 COPS7BQ9H9Q2 264 aaPredicted RBP6.93□□□□□ -1.3
COPS3-216ENST00000579716 CRTAC1Q9NQ79 661 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 AKAP7Q9P0M2 348 aaPredicted RBP6.93□□□□□ -1.3
COPS3-216ENST00000579716 USP36Q9P275 1121 aaKnown RBP6.93□□□□□ -1.3
COPS3-216ENST00000579716 MBD2Q9UBB5 411 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 AMACRQ9UHK6 382 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 PCDHA11Q9Y5I1 949 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 GMEB1Q9Y692 573 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 TTC41PQ6P2S7 1318 aa6.93□□□□□ -1.3
COPS3-216ENST00000579716 ARHGAP10A1A4S6 786 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 GOLGA6L4A6NEF3 574 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 ACOD1A6NK06 481 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 OPA1O60313 960 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 SYNCRIPO60506 623 aaKnown RBP6.92□□□□□ -1.3
COPS3-216ENST00000579716 PSPNO60542 156 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 RTN3O95197 1032 aaPredicted RBP6.92□□□□□ -1.3
COPS3-216ENST00000579716 UBTFL6P0CB48 400 aaPredicted RBP6.92□□□□□ -1.3
COPS3-216ENST00000579716 TROVE2P10155 538 aaKnown RBP eCLIP6.92□□□□□ -1.3
COPS3-216ENST00000579716 ZFXP17010 805 aaPredicted RBP6.92□□□□□ -1.3
COPS3-216ENST00000579716 ADSSP30520 456 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 HNF1BP35680 557 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 KRT2P35908 639 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 DIO1P49895 249 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 CASP5P51878 434 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 ERVK-21P61565 698 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 B2MP61769 119 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 RPP38P78345 283 aaKnown RBP6.92□□□□□ -1.3
COPS3-216ENST00000579716 TLE2Q04725 743 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 MAPK7Q13164 816 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 CBX3Q13185 183 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 RIPK1Q13546 671 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 STARD3Q14849 445 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 DPYSL2Q16555 572 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 TMEM266Q2M3C6 531 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 CCDC57Q2TAC2 916 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 LETM2Q2VYF4 491 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 AARDQ4LEZ3 155 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 SLC39A12Q504Y0 691 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 USP39Q53GS9 565 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms