RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 SMARCD2Q92925 531 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 IRF7Q92985 503 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 SLC35C1Q96A29 364 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 CDK5RAP1Q96SZ6 601 aaKnown RBP9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 PKMYT1Q99640 499 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 SEPT5Q99719 369 aaPredicted RBP9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 RTP3Q9BQQ7 232 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 APOL5Q9BWW9 433 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 SRRTQ9BXP5 876 aaKnown RBP9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 OSBPL6Q9BZF3 934 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 GZF1Q9H116 711 aaPredicted RBP9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 TASP1Q9H6P5 420 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 ANO10Q9NW15 660 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 ABI2Q9NYB9 513 aaPredicted RBP9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 DUSP12Q9UNI6 340 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 MRPS17Q9Y2R5 130 aaKnown RBP9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 CDH23Q9H251 3354 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 NCANO14594 1321 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 MAN2B1O00754 1011 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 NOL4O94818 638 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 VNN1O95497 513 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 AFPP02771 609 aaKnown RBP9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 PAEPP09466 180 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 TCF3P15923 654 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 RFX1P22670 979 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 IGFBP6P24592 240 aaPredicted RBP9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 EEF1GP26641 437 aaKnown RBP9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 GRIK1P39086 918 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 GCGRP47871 477 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 GCLMP48507 274 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 FMO5P49326 533 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 CLCN5P51795 746 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 WNT7BP56706 349 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 SNX16P57768 344 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 DLG4P78352 724 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 PPP3CAQ08209 521 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 CAMK4Q16566 473 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 LMBRD2Q68DH5 695 aaPredicted RBP9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 PHLDB3Q6NSJ2 640 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 DENND5BQ6ZUT9 1274 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 DDX42Q86XP3 938 aaKnown RBP eCLIP9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 FMNL3Q8IVF7 1028 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 MFSD6LQ8IWD5 586 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 TRIM59Q8IWR1 403 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 SMYD4Q8IYR2 804 aaPredicted RBP9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 ZNF276Q8N554 614 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 EHBP1Q8NDI1 1231 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 DNASE1L2Q92874 299 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 SMARCD1Q96GM5 515 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 SLITRK1Q96PX8 696 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 HNRNPABQ99729 332 aaKnown RBP9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 DUSP9Q99956 384 aaKnown RBP9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 IER2Q9BTL4 223 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 TTLL2Q9BWV7 592 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 CSNK1G1Q9HCP0 422 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 TRPM5Q9NZQ8 1165 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 CEP72Q9P209 647 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 SLC27A5Q9Y2P5 690 aa9.12□□□□□ -0.95
PPP4R1-210ENST00000578557 PTPRJQ12913 1337 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 MYBPHLA2RUH7 354 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 CHADO15335 359 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 CILPO75339 1184 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 CLSTN1O94985 981 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 PDGFRBP09619 1106 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 PSMC3P17980 439 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 BMP6P22004 513 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 LMO2P25791 158 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 AVPR1AP37288 418 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 TUBP50607 506 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 MFAP3P55082 362 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 CYP27A1Q02318 531 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 KCNH2Q12809 1159 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 HTR4Q13639 388 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 PREPLQ4J6C6 727 aaPredicted RBP9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 ARHGAP29Q52LW3 1261 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 DCAF17Q5H9S7 520 aaPredicted RBP9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 C1orf220Q5T0J3 134 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 CCDC183Q5T5S1 534 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 SNX30Q5VWJ9 437 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 KLHL10Q6JEL2 608 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 GET4Q7L5D6 327 aaPredicted RBP9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 MON1AQ86VX9 555 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 SUGP1Q8IWZ8 645 aaKnown RBP9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 NPAS3Q8IXF0 933 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 NUP93Q8N1F7 819 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 ARHGAP18Q8N392 663 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 CELF5Q8N6W0 485 aaKnown RBP9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 PLEKHO2Q8TD55 490 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 TAS1R2Q8TE23 839 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 PCED1BQ96HM7 432 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 TMEM176AQ96HP8 235 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 ASB16Q96NS5 453 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 NT5C1BQ96P26 610 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 PGLYRP2Q96PD5 576 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 TRMT61BQ9BVS5 477 aaKnown RBP9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 LRRC3Q9BY71 257 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 ATXN3LQ9H3M9 355 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 C8orf33Q9H7E9 229 aaPredicted RBP9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 CD320Q9NPF0 282 aa9.11□□□□□ -0.95
PPP4R1-210ENST00000578557 DMAP1Q9NPF5 467 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms