RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 SLC12A6Q9UHW9 1150 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 POLIQ9UNA4 740 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 FRMPD4Q14CM0 1322 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 SIGLEC1Q9BZZ2 1709 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 PMPCBO75439 489 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 FDX1P10109 184 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 ITGB5P18084 799 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 DEUP1Q05D60 604 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 PDCD2Q16342 344 aaPredicted RBP12.53□□□□□ -0.4
ERBB2-206ENST00000578373 KIZQ2M2Z5 673 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 FAM172AQ8WUF8 416 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 PGM2Q96G03 612 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 NAF1Q96HR8 494 aaKnown RBP12.53□□□□□ -0.4
ERBB2-206ENST00000578373 FOXP3Q9BZS1 431 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
ERBB2-206ENST00000578373 RXFP1Q9HBX9 757 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 PXMP2Q9NR77 195 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 SUN2Q9UH99 717 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 USP18Q9UMW8 372 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 PIK3CDO00329 1044 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 SNX3O60493 162 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 GH1P01241 217 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 HSPA8P11142 646 aaKnown RBP12.53□□□□□ -0.4
ERBB2-206ENST00000578373 SERPINB5P36952 375 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 ELF3P78545 371 aaPredicted RBP12.53□□□□□ -0.4
ERBB2-206ENST00000578373 CXCL9Q07325 125 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 PGM5Q15124 567 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 RASA2Q15283 850 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 NAIF1Q69YI7 327 aaPredicted RBP12.53□□□□□ -0.4
ERBB2-206ENST00000578373 EXOC3L1Q86VI1 746 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 GMCL1P1Q8NEA9 526 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 AFG1LQ8WV93 481 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 NCLNQ969V3 563 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 MYLK2Q9H1R3 596 aa12.53□□□□□ -0.4
ERBB2-206ENST00000578373 E9PBE3 544 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 KLHL41O60662 606 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 RPA3P35244 121 aaPredicted RBP12.52□□□□□ -0.4
ERBB2-206ENST00000578373 PLIN5Q00G26 463 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 CNGA2Q16280 664 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 NFIL3Q16649 462 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 ERMARDQ5T6L9 678 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 TTC39BQ5VTQ0 682 aaPredicted RBP12.52□□□□□ -0.4
ERBB2-206ENST00000578373 CPNE8Q86YQ8 564 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 TEKT4Q8WW24 435 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 EME1Q96AY2 570 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 TTYH3Q9C0H2 523 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 ING2Q9H160 280 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 BATF3Q9NR55 127 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 PACSIN3Q9UKS6 424 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 PPP1R12AO14974 1030 aaPredicted RBP12.52□□□□□ -0.4
ERBB2-206ENST00000578373 E2F6O75461 281 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 PSMD10O75832 226 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 ANGPTL8Q6UXH0 198 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 FBXO16Q8IX29 292 aaPredicted RBP12.52□□□□□ -0.4
ERBB2-206ENST00000578373 RIBC1Q8N443 379 aaPredicted RBP12.52□□□□□ -0.4
ERBB2-206ENST00000578373 RFWD2Q8NHY2 731 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 TMC2Q8TDI7 906 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 FHDC1Q9C0D6 1143 aaPredicted RBP12.52□□□□□ -0.4
ERBB2-206ENST00000578373 SMARCAD1Q9H4L7 1026 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 PLEKHA5Q9HAU0 1116 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 GRID1Q9ULK0 1009 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 DNAJC16Q9Y2G8 782 aa12.52□□□□□ -0.4
ERBB2-206ENST00000578373 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.52□□□□□ -0.41
ERBB2-206ENST00000578373 KBTBD13C9JR72 458 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 GOLGA8TH3BQL2 631 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 XPO1O14980 1071 aaKnown RBP12.52□□□□□ -0.41
ERBB2-206ENST00000578373 FSBPO95073 299 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 VIL1P09327 827 aaKnown RBP12.52□□□□□ -0.41
ERBB2-206ENST00000578373 SUPT20HL2P0C7V6 817 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 SETSIPP0DME0 302 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 GARTP22102 1010 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 KCNA4P22459 653 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 VCPP55072 806 aaKnown RBP12.52□□□□□ -0.41
ERBB2-206ENST00000578373 IER5Q5VY09 327 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 TEX9Q8N6V9 391 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 PTPRN2Q92932 1015 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 GPRASP2Q96D09 838 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 FER1L4A9Z1Z3 1794 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 MEI4A8MW99 385 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 S100BP04271 92 aaPredicted RBP12.52□□□□□ -0.41
ERBB2-206ENST00000578373 GFAPP14136 432 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 VHLP40337 213 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 NUDT2P50583 147 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 LY6KQ17RY6 165 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 DACT2Q5SW24 774 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 DUPD1Q68J44 220 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 ETNPPLQ8TBG4 499 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 HES6Q96HZ4 224 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 HSD17B14Q9BPX1 270 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 C12orf65Q9H3J6 166 aaKnown RBP12.52□□□□□ -0.41
ERBB2-206ENST00000578373 HACD3Q9P035 362 aa12.52□□□□□ -0.41
ERBB2-206ENST00000578373 EEF2KO00418 725 aaKnown RBP12.51□□□□□ -0.41
ERBB2-206ENST00000578373 MAFGO15525 162 aa12.51□□□□□ -0.41
ERBB2-206ENST00000578373 USP12O75317 370 aa12.51□□□□□ -0.41
ERBB2-206ENST00000578373 ZFXP17010 805 aaPredicted RBP12.51□□□□□ -0.41
ERBB2-206ENST00000578373 PAMP19021 973 aa12.51□□□□□ -0.41
ERBB2-206ENST00000578373 DRD4P21917 467 aa12.51□□□□□ -0.41
ERBB2-206ENST00000578373 STIP1P31948 543 aaKnown RBP12.51□□□□□ -0.41
ERBB2-206ENST00000578373 PAPOLAP51003 745 aaKnown RBP12.51□□□□□ -0.41
ERBB2-206ENST00000578373 FMO1Q01740 532 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms