RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 CELF5Q8N6W0 485 aaKnown RBP24.5■■□□□ 1.51
VAPA-205ENST00000578314 BPIFB1Q8TDL5 484 aa24.5■■□□□ 1.51
VAPA-205ENST00000578314 MRPS31Q92665 395 aaKnown RBP24.5■■□□□ 1.51
VAPA-205ENST00000578314 BCO2Q9BYV7 579 aa24.5■■□□□ 1.51
VAPA-205ENST00000578314 DPEP3Q9H4B8 488 aa24.5■■□□□ 1.51
VAPA-205ENST00000578314 SMYD3Q9H7B4 428 aa24.5■■□□□ 1.51
VAPA-205ENST00000578314 TADA3O75528 432 aa24.49■■□□□ 1.51
VAPA-205ENST00000578314 TARSP26639 723 aaKnown RBP24.49■■□□□ 1.51
VAPA-205ENST00000578314 AVPR1AP37288 418 aa24.49■■□□□ 1.51
VAPA-205ENST00000578314 GRIK1P39086 918 aa24.49■■□□□ 1.51
VAPA-205ENST00000578314 CDH8P55286 799 aa24.49■■□□□ 1.51
VAPA-205ENST00000578314 FZD5Q13467 585 aa24.49■■□□□ 1.51
VAPA-205ENST00000578314 TXNDC8Q6A555 127 aa24.49■■□□□ 1.51
VAPA-205ENST00000578314 ASCL5Q7RTU5 278 aa24.49■■□□□ 1.51
VAPA-205ENST00000578314 FRMD5Q7Z6J6 570 aa24.49■■□□□ 1.51
VAPA-205ENST00000578314 C1orf210Q8IVY1 113 aa24.49■■□□□ 1.51
VAPA-205ENST00000578314 ELOA2Q8IYF1 753 aaPredicted RBP24.49■■□□□ 1.51
VAPA-205ENST00000578314 FAM186BQ8IYM0 893 aa24.49■■□□□ 1.51
VAPA-205ENST00000578314 SMYD4Q8IYR2 804 aaPredicted RBP24.49■■□□□ 1.51
VAPA-205ENST00000578314 MAB21L3Q8N8X9 362 aa24.49■■□□□ 1.51
VAPA-205ENST00000578314 C8orf48Q96LL4 319 aa24.49■■□□□ 1.51
VAPA-205ENST00000578314 PIAS3Q9Y6X2 628 aa24.49■■□□□ 1.51
VAPA-205ENST00000578314 COL4A3Q01955 1670 aa24.49■■□□□ 1.51
VAPA-205ENST00000578314 TRIM66O15016 1216 aa24.48■■□□□ 1.51
VAPA-205ENST00000578314 NCAM2O15394 837 aa24.48■■□□□ 1.51
VAPA-205ENST00000578314 SMC2O95347 1197 aa24.48■■□□□ 1.51
VAPA-205ENST00000578314 RPS9P46781 194 aaKnown RBP24.48■■□□□ 1.51
VAPA-205ENST00000578314 ZNF658Q5TYW1 1059 aaPredicted RBP24.48■■□□□ 1.51
VAPA-205ENST00000578314 B3GALNT2Q8NCR0 500 aa24.48■■□□□ 1.51
VAPA-205ENST00000578314 CFAP54Q96N23 3096 aa24.48■■□□□ 1.51
VAPA-205ENST00000578314 SMG9Q9H0W8 520 aaKnown RBP24.48■■□□□ 1.51
VAPA-205ENST00000578314 PCDHA5Q9Y5H7 936 aa24.48■■□□□ 1.51
VAPA-205ENST00000578314 PRR23AA6NEV1 266 aa24.47■■□□□ 1.51
VAPA-205ENST00000578314 ASS1P00966 412 aaKnown RBP24.47■■□□□ 1.51
VAPA-205ENST00000578314 KRT13P13646 458 aa24.47■■□□□ 1.51
VAPA-205ENST00000578314 P4HA1P13674 534 aa24.47■■□□□ 1.51
VAPA-205ENST00000578314 PRCPP42785 496 aa24.47■■□□□ 1.51
VAPA-205ENST00000578314 PLCB2Q00722 1185 aa24.47■■□□□ 1.51
VAPA-205ENST00000578314 DENND5BQ6ZUT9 1274 aa24.47■■□□□ 1.51
VAPA-205ENST00000578314 CSGALNACT1Q8TDX6 532 aa24.47■■□□□ 1.51
VAPA-205ENST00000578314 FAM3CQ92520 227 aa24.47■■□□□ 1.51
VAPA-205ENST00000578314 USP13Q92995 863 aaPredicted RBP24.47■■□□□ 1.51
VAPA-205ENST00000578314 ELMO3Q96BJ8 720 aa24.47■■□□□ 1.51
VAPA-205ENST00000578314 MSANTD3Q96H12 275 aa24.47■■□□□ 1.51
VAPA-205ENST00000578314 B3GNT5Q9BYG0 378 aa24.47■■□□□ 1.51
VAPA-205ENST00000578314 GTPBP4Q9BZE4 634 aaKnown RBP24.47■■□□□ 1.51
VAPA-205ENST00000578314 ELOVL4Q9GZR5 314 aa24.47■■□□□ 1.51
VAPA-205ENST00000578314 SDCBP2Q9H190 292 aa24.47■■□□□ 1.51
VAPA-205ENST00000578314 TDP1Q9NUW8 608 aa24.47■■□□□ 1.51
VAPA-205ENST00000578314 THG1LQ9NWX6 298 aaKnown RBP24.47■■□□□ 1.51
VAPA-205ENST00000578314 HOOK1Q9UJC3 728 aaKnown RBP24.47■■□□□ 1.51
VAPA-205ENST00000578314 CIZ1Q9ULV3 898 aaPredicted RBP24.47■■□□□ 1.51
VAPA-205ENST00000578314 HLA-DRAP01903 254 aa24.46■■□□□ 1.51
VAPA-205ENST00000578314 ANXA13P27216 316 aa24.46■■□□□ 1.51
VAPA-205ENST00000578314 PPP3CAQ08209 521 aa24.46■■□□□ 1.51
VAPA-205ENST00000578314 ZNF268Q14587 947 aaPredicted RBP24.46■■□□□ 1.51
VAPA-205ENST00000578314 NKD2Q969F2 451 aaPredicted RBP24.46■■□□□ 1.51
VAPA-205ENST00000578314 SMARCE1Q969G3 411 aa24.46■■□□□ 1.51
VAPA-205ENST00000578314 TTLL2Q9BWV7 592 aa24.46■■□□□ 1.51
VAPA-205ENST00000578314 C8orf33Q9H7E9 229 aaPredicted RBP24.46■■□□□ 1.51
VAPA-205ENST00000578314 KIF9Q9HAQ2 790 aa24.46■■□□□ 1.51
VAPA-205ENST00000578314 EHD2Q9NZN4 543 aa24.46■■□□□ 1.51
VAPA-205ENST00000578314 CCL26Q9Y258 94 aa24.46■■□□□ 1.51
VAPA-205ENST00000578314 F5P12259 2224 aa24.46■■□□□ 1.51
VAPA-205ENST00000578314 F8VP50 259 aa24.45■■□□□ 1.5
VAPA-205ENST00000578314 TRIM49P0CI25 452 aa24.45■■□□□ 1.5
VAPA-205ENST00000578314 TRIM49CP0CI26 452 aa24.45■■□□□ 1.5
VAPA-205ENST00000578314 GTF2H1P32780 548 aa24.45■■□□□ 1.5
VAPA-205ENST00000578314 RAP1GAPP47736 663 aa24.45■■□□□ 1.5
VAPA-205ENST00000578314 GCLMP48507 274 aa24.45■■□□□ 1.5
VAPA-205ENST00000578314 NOP14P78316 857 aaKnown RBP24.45■■□□□ 1.5
VAPA-205ENST00000578314 C1orf228Q6PIY5 440 aa24.45■■□□□ 1.5
VAPA-205ENST00000578314 MAML2Q8IZL2 1156 aaPredicted RBP24.45■■□□□ 1.5
VAPA-205ENST00000578314 ZFYVE19Q96K21 471 aa24.45■■□□□ 1.5
VAPA-205ENST00000578314 TNIP3Q96KP6 325 aa24.45■■□□□ 1.5
VAPA-205ENST00000578314 ZNF518BQ9C0D4 1074 aa24.45■■□□□ 1.5
VAPA-205ENST00000578314 TMEM30AQ9NV96 361 aa24.45■■□□□ 1.5
VAPA-205ENST00000578314 CETN3O15182 167 aa24.44■■□□□ 1.5
VAPA-205ENST00000578314 PIK3CAP42336 1068 aa24.44■■□□□ 1.5
VAPA-205ENST00000578314 ASPAP45381 313 aa24.44■■□□□ 1.5
VAPA-205ENST00000578314 CACNA2D1P54289 1103 aa24.44■■□□□ 1.5
VAPA-205ENST00000578314 USP46P62068 366 aa24.44■■□□□ 1.5
VAPA-205ENST00000578314 SCARA5Q6ZMJ2 495 aa24.44■■□□□ 1.5
VAPA-205ENST00000578314 CRYBG2Q8N1P7 616 aa24.44■■□□□ 1.5
VAPA-205ENST00000578314 ERCC4Q92889 916 aaPredicted RBP24.44■■□□□ 1.5
VAPA-205ENST00000578314 FAM83CQ9BQN1 747 aa24.44■■□□□ 1.5
VAPA-205ENST00000578314 TMEM8AQ9HCN3 771 aa24.44■■□□□ 1.5
VAPA-205ENST00000578314 GCNT4Q9P109 453 aa24.44■■□□□ 1.5
VAPA-205ENST00000578314 NDRG2Q9UN36 371 aaKnown RBP24.44■■□□□ 1.5
VAPA-205ENST00000578314 MIA3Q5JRA6 1907 aa24.43■■□□□ 1.5
VAPA-205ENST00000578314 CLDN5O00501 218 aa24.43■■□□□ 1.5
VAPA-205ENST00000578314 CLSTN1O94985 981 aa24.43■■□□□ 1.5
VAPA-205ENST00000578314 CCNE1P24864 410 aa24.43■■□□□ 1.5
VAPA-205ENST00000578314 KPNA1P52294 538 aaPredicted RBP24.43■■□□□ 1.5
VAPA-205ENST00000578314 SPOPLQ6IQ16 392 aa24.43■■□□□ 1.5
VAPA-205ENST00000578314 PAQR9Q6ZVX9 377 aa24.43■■□□□ 1.5
VAPA-205ENST00000578314 UNC93AQ86WB7 457 aa24.43■■□□□ 1.5
VAPA-205ENST00000578314 RALGPS2Q86X27 583 aaPredicted RBP24.43■■□□□ 1.5
VAPA-205ENST00000578314 ZC3H3Q8IXZ2 948 aaKnown RBP24.43■■□□□ 1.5
VAPA-205ENST00000578314 ADSSL1Q8N142 457 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms