RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 RAB33AQ14088 237 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 CFAP221Q4G0U5 840 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 SLC39A12Q504Y0 691 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 TDRD12Q587J7 1177 aaKnown RBP11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 MDH1BQ5I0G3 518 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 LCLAT1Q6UWP7 414 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 TRIM72Q6ZMU5 477 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 SLC47A2Q86VL8 602 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 SPATA2LQ8IUW3 424 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 ZNF606Q8WXB4 792 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 MRPL38Q96DV4 380 aaKnown RBP11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 CYFIP2Q96F07 1278 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 HNRNPABQ99729 332 aaKnown RBP11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 PDCL3Q9H2J4 239 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 CRTAC1Q9NQ79 661 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 LMCD1Q9NZU5 365 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 HSFX1Q9UBD0 423 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 AFF4Q9UHB7 1163 aaKnown RBP11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 NOCTQ9UK39 431 aaKnown RBP11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 GTF3C4Q9UKN8 822 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 PCDHGC3Q9UN70 934 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 CEP83Q9Y592 693 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 PCDHB5Q9Y5E4 795 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 TRANK1O15050 2925 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 ATG2AQ2TAZ0 1938 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 LAMA2P24043 3122 aaKnown RBP11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 SSU72P8A0A1W2PR75 194 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 MYBPHLA2RUH7 354 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 O00370 1275 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 TEX28O15482 410 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 HCRTO43612 131 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 ATP2C2O75185 946 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 LSM8O95777 96 aaKnown RBP11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 PTMAP06454 111 aaKnown RBP11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 CNPP09543 421 aaKnown RBP11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 FAM200BP0CF97 657 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 BRD2P25440 801 aaKnown RBP11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 MAGEA11P43364 429 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 BCAT1P54687 386 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 ARPP19P56211 112 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 ROR1Q01973 937 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 CYP27A1Q02318 531 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 CAMK1Q14012 370 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 ZNF697Q5TEC3 545 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 E4F1Q66K89 784 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 PPP1R2P3Q6NXS1 205 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 ELMSAN1Q6PJG2 1045 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 VSTM1Q6UX27 236 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 RSPO2Q6UXX9 243 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 RTL10Q7L3V2 364 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 NOP9Q86U38 636 aaKnown RBP11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 FAM35AQ86V20 835 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 C12orf29Q8N999 325 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 CCDC112Q8NEF3 446 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 ZNF461Q8TAF7 563 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 AUTS2Q8WXX7 1259 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 MYLPFQ96A32 169 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 SMARCD1Q96GM5 515 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 PCED1BQ96HM7 432 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 KLHL5Q96PQ7 755 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 PPP1R9BQ96SB3 815 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 TMEM209Q96SK2 561 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 CDCA3Q99618 268 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 MED10Q9BTT4 135 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 TMUB1Q9BVT8 246 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 FAM49BQ9NUQ9 324 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 DPP7Q9UHL4 492 aa11.86□□□□□ -0.51
TRAPPC8-204ENST00000578252 MYH10P35580 1976 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 WDR27A2RRH5 827 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 MTMR11A4FU01 709 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 EPOPA6NHQ4 379 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 ABLIM3O94929 683 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 OR4Q2P0C623 313 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 SETSIPP0DME0 302 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 CCDC130P13994 396 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 ATF2P15336 505 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 RPL17P18621 184 aaKnown RBP11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 KLRC2P26717 231 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 TUFMP49411 452 aaKnown RBP11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 BST2Q10589 180 aaKnown RBP11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 GOLGA7BQ2TAP0 167 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 PPP1R26Q5T8A7 1209 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 HGSNATQ68CP4 663 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 WDR59Q6PJI9 974 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 CYP26C1Q6V0L0 522 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 CCDC186Q7Z3E2 898 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 LRRTM3Q86VH5 581 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 TMTC1Q8IUR5 882 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 FUKQ8N0W3 1084 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 ANKRD52Q8NB46 1076 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 SLC2A14Q8TDB8 520 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 HDAC7Q8WUI4 952 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 TFAP2BQ92481 460 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 DDX1Q92499 740 aaKnown RBP11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 CEP295NLQ96MC4 621 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 AGPAT1Q99943 283 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 B3GNT5Q9BYG0 378 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 ZNF518BQ9C0D4 1074 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 LHX5Q9H2C1 402 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms