RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 POLNQ7Z5Q5 900 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 UNC45BQ8IWX7 931 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 CALN1Q9BXU9 219 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 LGALS13Q9UHV8 139 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 TCRBV7S3A2A0A539 114 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 MCF2P10911 925 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 PTPN7P35236 360 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 LAMC2Q13753 1193 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 HADHQ16836 314 aaKnown RBP18.44■□□□□ 0.54
ERBB2-205ENST00000578199 CDO1Q16878 200 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 C15orf59Q2T9L4 293 aaPredicted RBP18.44■□□□□ 0.54
ERBB2-205ENST00000578199 TRNP1Q6NT89 227 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 NPNTQ6UXI9 565 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 RFX6Q8HWS3 928 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 ANKS4BQ8N8V4 417 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 CCHCR1Q8TD31 782 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 MAML1Q92585 1016 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 PRCCQ92733 491 aaPredicted RBP18.44■□□□□ 0.54
ERBB2-205ENST00000578199 PEBP4Q96S96 227 aa18.44■□□□□ 0.54
ERBB2-205ENST00000578199 PAIP2Q9BPZ3 127 aaKnown RBP18.44■□□□□ 0.54
ERBB2-205ENST00000578199 KRT7P08729 469 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 CTCFP49711 727 aaPredicted RBP18.43■□□□□ 0.54
ERBB2-205ENST00000578199 RGS7P49802 495 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 TMEM132DQ14C87 1099 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 MSS51Q4VC12 460 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 FNBP1LQ5T0N5 605 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 C9orf131Q5VYM1 1079 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 CFAP57Q96MR6 1250 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 C16orf70Q9BSU1 422 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 NFKBIZQ9BYH8 718 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 ZNF408Q9H9D4 720 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 ZNF268Q14587 947 aaPredicted RBP18.43■□□□□ 0.54
ERBB2-205ENST00000578199 MORF4L2Q15014 288 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 PKN2Q16513 984 aaKnown RBP18.43■□□□□ 0.54
ERBB2-205ENST00000578199 MTHFD1LQ6UB35 978 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 LINC01465Q8N7H1 131 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 ADPGKQ9BRR6 497 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 PCDH9Q9HC56 1237 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 ABCF3Q9NUQ8 709 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 HAUS2Q9NVX0 235 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 DPP3Q9NY33 737 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 USP18Q9UMW8 372 aa18.43■□□□□ 0.54
ERBB2-205ENST00000578199 SNX3O60493 162 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 STX2P32856 288 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 RPL22P35268 128 aaKnown RBP18.42■□□□□ 0.54
ERBB2-205ENST00000578199 ZNF792Q3KQV3 632 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 FAM133BQ5BKY9 247 aaKnown RBP18.42■□□□□ 0.54
ERBB2-205ENST00000578199 FAM71DQ8N9W8 422 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 CKAP2Q8WWK9 683 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 LPIN3Q9BQK8 851 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 E5RJQ4 531 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 H3BRB1 525 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 HGSO14964 777 aaPredicted RBP18.42■□□□□ 0.54
ERBB2-205ENST00000578199 TSPAN1O60635 241 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 SSTR1P30872 391 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 TNFAIP2Q03169 654 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 EFTUD2Q15029 972 aaKnown RBP eCLIP18.42■□□□□ 0.541e-6■■■■■ 28.1
ERBB2-205ENST00000578199 FAM187BQ17R55 369 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 BBS12Q6ZW61 710 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 C4orf33Q8N1A6 199 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 RSAD2Q8WXG1 361 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 CPT1BQ92523 772 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 MCRS1Q96EZ8 462 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 KDM4CQ9H3R0 1056 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 ASB7Q9H672 318 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 TUT1Q9H6E5 874 aaKnown RBP18.42■□□□□ 0.54
ERBB2-205ENST00000578199 SLC40A1Q9NP59 571 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 TSPAN16Q9UKR8 245 aa18.42■□□□□ 0.54
ERBB2-205ENST00000578199 TRIP11Q15643 1979 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 PPEF2O14830 753 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 RNF8O76064 485 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 TRUB2O95900 331 aaKnown RBP18.41■□□□□ 0.54
ERBB2-205ENST00000578199 GPX6P59796 221 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 KIZQ2M2Z5 673 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 LACTB2Q53H82 288 aaPredicted RBP18.41■□□□□ 0.54
ERBB2-205ENST00000578199 OR6B2Q6IFH4 312 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 ZC3H18Q86VM9 953 aaKnown RBP18.41■□□□□ 0.54
ERBB2-205ENST00000578199 GPRC5AQ8NFJ5 357 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 FNIP1Q8TF40 1166 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 LRRN4Q8WUT4 740 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 KIF12Q96FN5 646 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 ACAP3Q96P50 834 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 TGS1Q96RS0 853 aaKnown RBP18.41■□□□□ 0.54
ERBB2-205ENST00000578199 FARP1Q9Y4F1 1045 aaPredicted RBP18.41■□□□□ 0.54
ERBB2-205ENST00000578199 ALOX15BO15296 676 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 EPHX2P34913 555 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 ITIH4Q14624 930 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 CCDC142Q17RM4 750 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 MARCH8Q5T0T0 291 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 FAM183BPQ6ZVS7 135 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 CENPUQ71F23 418 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 PPTC7Q8NI37 304 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 ACTR5Q9H9F9 607 aaPredicted RBP18.41■□□□□ 0.54
ERBB2-205ENST00000578199 WDR35Q9P2L0 1181 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 HES2Q9Y543 173 aa18.41■□□□□ 0.54
ERBB2-205ENST00000578199 A0A1W2PPM1 405 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 MAP3K6O95382 1288 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 ABHD2P08910 425 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 VDRP11473 427 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 YBX3P16989 372 aaKnown RBP eCLIP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms