RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 MYO3BQ8WXR4 1341 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 SAGE2PA6NJ88 616 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 TRIM49D1C9J1S8 452 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 PEX11AO75192 247 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 TOMM70O94826 608 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 TOP3BO95985 862 aaKnown RBP4.59□□□□□ -1.67
CDH8-205ENST00000577730 CYP2C9P11712 490 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 SULT2A1Q06520 285 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 ATP13A5Q4VNC0 1218 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 CMPK2Q5EBM0 449 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 LPCAT4Q643R3 524 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 RASSF6Q6ZTQ3 369 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 FRMD7Q6ZUT3 714 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 KRT74Q7RTS7 529 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 IFNEQ86WN2 208 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 SLC13A5Q86YT5 568 aaPredicted RBP4.59□□□□□ -1.67
CDH8-205ENST00000577730 ULK2Q8IYT8 1036 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.59□□□□□ -1.67
CDH8-205ENST00000577730 KCNH5Q8NCM2 988 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 KBTBD8Q8NFY9 601 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 PDCD6IPQ8WUM4 868 aaKnown RBP4.59□□□□□ -1.67
CDH8-205ENST00000577730 TLR10Q9BXR5 811 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 SEMA6AQ9H2E6 1030 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 VTA1Q9NP79 307 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 USE1Q9NZ43 259 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 ARMCX1Q9P291 453 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 USP20Q9Y2K6 914 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 GAPVD1Q14C86 1478 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 STMND1H3BQB6 276 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 WASLO00401 505 aaPredicted RBP4.59□□□□□ -1.67
CDH8-205ENST00000577730 TLR2O60603 784 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 CRYZL1O95825 349 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 FTLP02792 175 aaPredicted RBP4.59□□□□□ -1.67
CDH8-205ENST00000577730 VCLP18206 1134 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 ATF6P18850 670 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 SERPINB5P36952 375 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 CSE1LP55060 971 aaKnown RBP4.59□□□□□ -1.67
CDH8-205ENST00000577730 FOXD4Q12950 439 aaPredicted RBP4.59□□□□□ -1.67
CDH8-205ENST00000577730 LSAMPQ13449 338 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 TCIRG1Q13488 830 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 CARTPTQ16568 116 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 MICALL2Q8IY33 904 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 AMER2Q8N7J2 671 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 FARSBQ9NSD9 589 aaKnown RBP4.59□□□□□ -1.67
CDH8-205ENST00000577730 QPCTLQ9NXS2 382 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 KIAA1024Q9UPX6 916 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 TPRKBQ9Y3C4 175 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 PSMD12O00232 456 aaPredicted RBP4.59□□□□□ -1.67
CDH8-205ENST00000577730 PRKD3O94806 890 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 LGALS3BPQ08380 585 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 SPIRE1Q08AE8 756 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 PUS10Q3MIT2 529 aaKnown RBP4.59□□□□□ -1.67
CDH8-205ENST00000577730 KLHDC7AQ5VTJ3 777 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 ARHGAP17Q68EM7 881 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 C6orf89Q6UWU4 347 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 DHFR2Q86XF0 187 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 PHC2Q8IXK0 858 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 NDUFAF2Q8N183 169 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 FITM2Q8N6M3 262 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 OR8H1Q8NGG4 311 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 WDR36Q8NI36 951 aaKnown RBP4.59□□□□□ -1.67
CDH8-205ENST00000577730 HELQQ8TDG4 1101 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 METTL22Q9BUU2 404 aaPredicted RBP4.59□□□□□ -1.67
CDH8-205ENST00000577730 CALN1Q9BXU9 219 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 EBF3Q9H4W6 596 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 TOR4AQ9NXH8 423 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 RTCBQ9Y3I0 505 aaKnown RBP4.59□□□□□ -1.67
CDH8-205ENST00000577730 A0A1W2PP64 1363 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 A0A0J9YVX5 310 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 CLIC2O15247 247 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 GSC2O15499 205 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 TRIM13O60858 407 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 GJA9P57773 515 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 PTENP60484 403 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 FAPQ12884 760 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 PON2Q15165 354 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 KHDC1Q4VXA5 237 aaKnown RBP4.59□□□□□ -1.67
CDH8-205ENST00000577730 AKAP4Q5JQC9 854 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 C1QTNF12Q5T7M4 302 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 GARNL3Q5VVW2 1013 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 METTL21CQ5VZV1 264 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 SYCE2Q6PIF2 218 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 ZBTB46Q86UZ6 589 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 SNX32Q86XE0 403 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 MYO1HQ8N1T3 1032 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 SETD9Q8NE22 299 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 SHCBP1Q8NEM2 672 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 TPCN2Q8NHX9 752 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 SPIRE2Q8WWL2 714 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 PAFAH2Q99487 392 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 SMARCAD1Q9H4L7 1026 aa4.59□□□□□ -1.67
CDH8-205ENST00000577730 RFX7Q2KHR2 1363 aa4.59□□□□□ -1.68
CDH8-205ENST00000577730 PLEKHG1Q9ULL1 1385 aa4.59□□□□□ -1.68
CDH8-205ENST00000577730 MYO1GB0I1T2 1018 aa4.59□□□□□ -1.68
CDH8-205ENST00000577730 RHOBTB3O94955 611 aa4.59□□□□□ -1.68
CDH8-205ENST00000577730 ADAMTS2O95450 1211 aa4.59□□□□□ -1.68
CDH8-205ENST00000577730 ITGALP20701 1170 aa4.59□□□□□ -1.68
CDH8-205ENST00000577730 KPNA1P52294 538 aaPredicted RBP4.59□□□□□ -1.68
CDH8-205ENST00000577730 VBP1P61758 197 aa4.59□□□□□ -1.68
CDH8-205ENST00000577730 MRPS22P82650 360 aaKnown RBP4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms