RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 ASB2Q96Q27 587 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 WDCPQ9H6R7 721 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 EHD3Q9NZN3 535 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 CFAP97Q9P2B7 532 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 SLC45A2Q9UMX9 530 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 SQORQ9Y6N5 450 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 IFITM10A6NMD0 228 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 DTNBO60941 627 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 VCAM1P19320 739 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 PDCP20941 246 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 ATP5F1P24539 256 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-202ENST00000577541 EVA1CP58658 441 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 MC2RQ01718 297 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 NOGQ13253 232 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 PTPROQ16827 1216 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 UAP1L1Q3KQV9 507 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 KHDC1Q4VXA5 237 aaKnown RBP3.25□□□□□ -1.89
TOP2A-202ENST00000577541 TAPT1Q6NXT6 567 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 GPATCH3Q96I76 525 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 VRK1Q99986 396 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-202ENST00000577541 SIK2Q9H0K1 926 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 HOMER2Q9NSB8 354 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 TRMT13Q9NUP7 481 aaKnown RBP3.25□□□□□ -1.89
TOP2A-202ENST00000577541 POT1Q9NUX5 634 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 DKK3Q9UBP4 350 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 CDYLQ9Y232 598 aa3.25□□□□□ -1.89
TOP2A-202ENST00000577541 NOP58Q9Y2X3 529 aaKnown RBP3.25□□□□□ -1.89
TOP2A-202ENST00000577541 GNAI3P08754 354 aa3.24□□□□□ -1.89
TOP2A-202ENST00000577541 RARBP10826 455 aa3.24□□□□□ -1.89
TOP2A-202ENST00000577541 PIK3CGP48736 1102 aa3.24□□□□□ -1.89
TOP2A-202ENST00000577541 TOB1P50616 345 aaPredicted RBP3.24□□□□□ -1.89
TOP2A-202ENST00000577541 NEK2P51955 445 aa3.24□□□□□ -1.89
TOP2A-202ENST00000577541 GNAI1P63096 354 aa3.24□□□□□ -1.89
TOP2A-202ENST00000577541 BMPR2Q13873 1038 aa3.24□□□□□ -1.89
TOP2A-202ENST00000577541 FAM50AQ14320 339 aaKnown RBP3.24□□□□□ -1.89
TOP2A-202ENST00000577541 HABP2Q14520 560 aaPredicted RBP3.24□□□□□ -1.89
TOP2A-202ENST00000577541 ATAT1Q5SQI0 421 aa3.24□□□□□ -1.89
TOP2A-202ENST00000577541 FBXO41Q8TF61 875 aa3.24□□□□□ -1.89
TOP2A-202ENST00000577541 DDX17Q92841 729 aaKnown RBP3.24□□□□□ -1.89
TOP2A-202ENST00000577541 TRIB1Q96RU8 372 aa3.24□□□□□ -1.89
TOP2A-202ENST00000577541 SMOQ99835 787 aa3.24□□□□□ -1.89
TOP2A-202ENST00000577541 CNPPD1Q9BV87 410 aa3.24□□□□□ -1.89
TOP2A-202ENST00000577541 MRPL46Q9H2W6 279 aaKnown RBP3.24□□□□□ -1.89
TOP2A-202ENST00000577541 BRD9Q9H8M2 597 aa3.24□□□□□ -1.89
TOP2A-202ENST00000577541 KLHL13Q9P2N7 655 aa3.24□□□□□ -1.89
TOP2A-202ENST00000577541 SLC28A2O43868 658 aa3.23□□□□□ -1.89
TOP2A-202ENST00000577541 SNUPNO95149 360 aaKnown RBP3.23□□□□□ -1.89
TOP2A-202ENST00000577541 GJB1P08034 283 aa3.23□□□□□ -1.89
TOP2A-202ENST00000577541 TYRP14679 529 aa3.23□□□□□ -1.89
TOP2A-202ENST00000577541 IL1R2P27930 398 aa3.23□□□□□ -1.89
TOP2A-202ENST00000577541 NPTX2P47972 431 aa3.23□□□□□ -1.89
TOP2A-202ENST00000577541 NKX6-1P78426 367 aaPredicted RBP3.23□□□□□ -1.89
TOP2A-202ENST00000577541 C10orf25Q5T742 122 aa3.23□□□□□ -1.89
TOP2A-202ENST00000577541 ZNF804AQ7Z570 1209 aa3.23□□□□□ -1.89
TOP2A-202ENST00000577541 FAM9AQ8IZU1 332 aaPredicted RBP3.23□□□□□ -1.89
TOP2A-202ENST00000577541 SLC17A8Q8NDX2 589 aa3.23□□□□□ -1.89
TOP2A-202ENST00000577541 HSPBAP1Q96EW2 488 aa3.23□□□□□ -1.89
TOP2A-202ENST00000577541 ZPBPQ9BS86 351 aa3.23□□□□□ -1.89
TOP2A-202ENST00000577541 GTPBP4Q9BZE4 634 aaKnown RBP3.23□□□□□ -1.89
TOP2A-202ENST00000577541 IMPG2Q9BZV3 1241 aa3.23□□□□□ -1.89
TOP2A-202ENST00000577541 TINAGL1Q9GZM7 467 aaPredicted RBP3.23□□□□□ -1.89
TOP2A-202ENST00000577541 SLC12A5Q9H2X9 1139 aa3.23□□□□□ -1.89
TOP2A-202ENST00000577541 ARHGEF3Q9NR81 526 aa3.23□□□□□ -1.89
TOP2A-202ENST00000577541 A0A0B4J269 797 aa3.22□□□□□ -1.89
TOP2A-202ENST00000577541 LRRC14BA6NHZ5 514 aa3.22□□□□□ -1.89
TOP2A-202ENST00000577541 FCHO1O14526 889 aa3.22□□□□□ -1.89
TOP2A-202ENST00000577541 TOMM40O96008 361 aa3.22□□□□□ -1.89
TOP2A-202ENST00000577541 MAP2K6P52564 334 aa3.22□□□□□ -1.89
TOP2A-202ENST00000577541 TUBB3Q13509 450 aa3.22□□□□□ -1.89
TOP2A-202ENST00000577541 PGS1Q32NB8 556 aa3.22□□□□□ -1.89
TOP2A-202ENST00000577541 AARS2Q5JTZ9 985 aaKnown RBP3.22□□□□□ -1.89
TOP2A-202ENST00000577541 HEATR3Q7Z4Q2 680 aa3.22□□□□□ -1.89
TOP2A-202ENST00000577541 ZBTB46Q86UZ6 589 aa3.22□□□□□ -1.89
TOP2A-202ENST00000577541 PSD4Q8NDX1 1056 aa3.22□□□□□ -1.89
TOP2A-202ENST00000577541 NSUN7Q8NE18 718 aaKnown RBP3.22□□□□□ -1.89
TOP2A-202ENST00000577541 FKBP10Q96AY3 582 aa3.22□□□□□ -1.89
TOP2A-202ENST00000577541 FAM118BQ9BPY3 351 aa3.22□□□□□ -1.89
TOP2A-202ENST00000577541 AMBRA1Q9C0C7 1298 aa3.22□□□□□ -1.89
TOP2A-202ENST00000577541 FEZ2Q9UHY8 353 aaPredicted RBP3.22□□□□□ -1.89
TOP2A-202ENST00000577541 PNMA8BQ9ULN7 279 aaPredicted RBP3.22□□□□□ -1.89
TOP2A-202ENST00000577541 AGAP1Q9UPQ3 857 aa3.22□□□□□ -1.89
TOP2A-202ENST00000577541 E2F8A0AVK6 867 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 ZNF785A8K8V0 405 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 POLRMTO00411 1230 aaKnown RBP3.21□□□□□ -1.9
TOP2A-202ENST00000577541 TOR1BO14657 336 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 TRIAP1O43715 76 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 FTLP02792 175 aaPredicted RBP3.21□□□□□ -1.9
TOP2A-202ENST00000577541 PSG1P11464 419 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 CCND1P24385 295 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 SMARCA1P28370 1054 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 NDUFV1P49821 464 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 ZNF135P52742 658 aaPredicted RBP3.21□□□□□ -1.9
TOP2A-202ENST00000577541 MCL1Q07820 350 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 TAF2Q6P1X5 1199 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 ANKRD16Q6P6B7 361 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 CUZD1Q86UP6 607 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 PIM3Q86V86 326 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 PPP1R3BQ86XI6 285 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 HPS3Q969F9 1004 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 MVB12AQ96EY5 273 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms