RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 CACTINQ8WUQ7 758 aaKnown RBP14.34□□□□□ -0.11
COPS3-214ENST00000577246 POMGNT1Q8WZA1 660 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 HVCN1Q96D96 273 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 CEP295NLQ96MC4 621 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 CYP2S1Q96SQ9 504 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 ST6GALNAC4Q9H4F1 302 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 POLMQ9NP87 494 aaPredicted RBP14.34□□□□□ -0.11
COPS3-214ENST00000577246 TMLHEQ9NVH6 421 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 CIZ1Q9ULV3 898 aaPredicted RBP14.34□□□□□ -0.11
COPS3-214ENST00000577246 MSRB2Q9Y3D2 182 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 STYXL1Q9Y6J8 313 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 FRYQ5TBA9 3013 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 UPK3BL1B0FP48 263 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 UPK3BL2E5RIL1 263 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 K7EQS6 105 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 SLC9A3R1O14745 358 aaPredicted RBP14.33□□□□□ -0.12
COPS3-214ENST00000577246 BCKDHBP21953 392 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 LHX1P48742 406 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 ATXN3P54252 364 aaPredicted RBP14.33□□□□□ -0.12
COPS3-214ENST00000577246 DHX8Q14562 1220 aaKnown RBP14.33□□□□□ -0.12
COPS3-214ENST00000577246 EOGTQ5NDL2 527 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 LRSAM1Q6UWE0 723 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 C4orf50Q6ZRC1 276 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 RABEPKQ7Z6M1 372 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 HDDC3Q8N4P3 179 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 LRRC52Q8N7C0 313 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 STKLD1Q8NE28 680 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 OLIG1Q8TAK6 271 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 GCNT4Q9P109 453 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 BCCIPQ9P287 314 aaKnown RBP eCLIP14.33□□□□□ -0.12
COPS3-214ENST00000577246 LHX6Q9UPM6 363 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 R3HCC1Q9Y3T6 440 aaKnown RBP14.33□□□□□ -0.12
COPS3-214ENST00000577246 ATRXP46100 2492 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 SDK1Q7Z5N4 2213 aa14.33□□□□□ -0.12
COPS3-214ENST00000577246 ANKRD63C9JTQ0 380 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 ENGP17813 658 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 POLR2BP30876 1174 aaKnown RBP14.32□□□□□ -0.12
COPS3-214ENST00000577246 EIF2DP41214 584 aaKnown RBP14.32□□□□□ -0.12
COPS3-214ENST00000577246 P2RY2P41231 377 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 MAGEA11P43364 429 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 MAPK8P45983 427 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 PPP3CCP48454 512 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 TFAMQ00059 246 aaKnown RBP14.32□□□□□ -0.12
COPS3-214ENST00000577246 HNRNPDQ14103 355 aaKnown RBP14.32□□□□□ -0.12
COPS3-214ENST00000577246 LYSMD4Q5XG99 296 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 KIAA1211LQ6NV74 962 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 SCN4BQ8IWT1 228 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 CCDC33Q8N5R6 958 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 KRI1Q8N9T8 703 aaKnown RBP14.32□□□□□ -0.12
COPS3-214ENST00000577246 CEP76Q8TAP6 659 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 SLC22A12Q96S37 553 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 TRPM5Q9NZQ8 1165 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 GTF3C4Q9UKN8 822 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 ITGA11Q9UKX5 1188 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 L1RE1Q9UN81 338 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 AGAP1Q9UPQ3 857 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 EXOC7Q9UPT5 735 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 ASPMQ8IZT6 3477 aa14.32□□□□□ -0.12
COPS3-214ENST00000577246 BAHCC1Q9P281 2608 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 C2orf78A6NCI8 922 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.31□□□□□ -0.12
COPS3-214ENST00000577246 TULP1O00294 542 aaPredicted RBP14.31□□□□□ -0.12
COPS3-214ENST00000577246 HYAL3O43820 417 aaPredicted RBP14.31□□□□□ -0.12
COPS3-214ENST00000577246 TOP3BO95985 862 aaKnown RBP14.31□□□□□ -0.12
COPS3-214ENST00000577246 LDHAP00338 332 aaKnown RBP14.31□□□□□ -0.12
COPS3-214ENST00000577246 APODP05090 189 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 ITGB3P05106 788 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 ACAT1P24752 427 aaKnown RBP14.31□□□□□ -0.12
COPS3-214ENST00000577246 OPRD1P41143 372 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 SIM1P81133 766 aaPredicted RBP14.31□□□□□ -0.12
COPS3-214ENST00000577246 RING1Q06587 406 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 MAPRE1Q15691 268 aaKnown RBP14.31□□□□□ -0.12
COPS3-214ENST00000577246 PREPLQ4J6C6 727 aaPredicted RBP14.31□□□□□ -0.12
COPS3-214ENST00000577246 SLC23A3Q6PIS1 610 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 VSTM1Q6UX27 236 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 ADGRF2Q8IZF7 708 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 TOP6BLQ8N6T0 577 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 RAD54LQ92698 747 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 SPATA17Q96L03 361 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 FIZ1Q96SL8 496 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 PNKPQ96T60 521 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 LINC00597Q9H2U6 94 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 GDAP2Q9NXN4 497 aa14.31□□□□□ -0.12
COPS3-214ENST00000577246 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 AP5Z1O43299 807 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 KLF8O95600 359 aaPredicted RBP14.3□□□□□ -0.12
COPS3-214ENST00000577246 BMP15O95972 392 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 ADH1CP00326 375 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 HOXB3P14651 431 aaPredicted RBP14.3□□□□□ -0.12
COPS3-214ENST00000577246 ANXA13P27216 316 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 RBP5P82980 135 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 GFPT1Q06210 699 aaPredicted RBP14.3□□□□□ -0.12
COPS3-214ENST00000577246 MYO1EQ12965 1108 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 SEMA3BQ13214 749 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 MCM6Q14566 821 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 ZC2HC1CQ53FD0 456 aaPredicted RBP14.3□□□□□ -0.12
COPS3-214ENST00000577246 CRELD2Q6UXH1 353 aaPredicted RBP14.3□□□□□ -0.12
COPS3-214ENST00000577246 DPH6Q7L8W6 267 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 TRMT11Q7Z4G4 463 aaKnown RBP14.3□□□□□ -0.12
COPS3-214ENST00000577246 DDX42Q86XP3 938 aaKnown RBP eCLIP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms