RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 NUP62CLQ9H1M0 184 aa6.48□□□□□ -1.37
NUP88-213ENST00000576862 XPNPEP3Q9NQH7 507 aa6.48□□□□□ -1.37
NUP88-213ENST00000576862 EHD3Q9NZN3 535 aa6.48□□□□□ -1.37
NUP88-213ENST00000576862 C11orf21Q9P2W6 132 aa6.48□□□□□ -1.37
NUP88-213ENST00000576862 FAM50BQ9Y247 325 aa6.48□□□□□ -1.37
NUP88-213ENST00000576862 ZAR1LA6NP61 321 aa6.47□□□□□ -1.37
NUP88-213ENST00000576862 NR2F6P10588 404 aa6.47□□□□□ -1.37
NUP88-213ENST00000576862 TRIM27P14373 513 aa6.47□□□□□ -1.37
NUP88-213ENST00000576862 JUPP14923 745 aa6.47□□□□□ -1.37
NUP88-213ENST00000576862 ZFXP17010 805 aaPredicted RBP6.47□□□□□ -1.37
NUP88-213ENST00000576862 KLRC1P26715 233 aa6.47□□□□□ -1.37
NUP88-213ENST00000576862 LIPAP38571 399 aa6.47□□□□□ -1.37
NUP88-213ENST00000576862 CACNA2D1P54289 1103 aa6.47□□□□□ -1.37
NUP88-213ENST00000576862 INHBEP58166 350 aa6.47□□□□□ -1.37
NUP88-213ENST00000576862 COBLL1Q53SF7 1204 aa6.47□□□□□ -1.37
NUP88-213ENST00000576862 FAM98AQ8NCA5 519 aaKnown RBP6.47□□□□□ -1.37
NUP88-213ENST00000576862 BPIFB1Q8TDL5 484 aa6.47□□□□□ -1.37
NUP88-213ENST00000576862 ZNHIT2Q9UHR6 403 aa6.47□□□□□ -1.37
NUP88-213ENST00000576862 TLK1Q9UKI8 766 aa6.47□□□□□ -1.37
NUP88-213ENST00000576862 APAF1O14727 1248 aa6.46□□□□□ -1.38
NUP88-213ENST00000576862 TLR5O60602 858 aa6.46□□□□□ -1.38
NUP88-213ENST00000576862 PQBP1O60828 265 aaKnown RBP6.46□□□□□ -1.38
NUP88-213ENST00000576862 URI1O94763 535 aaPredicted RBP6.46□□□□□ -1.38
NUP88-213ENST00000576862 RPL17P18621 184 aaKnown RBP6.46□□□□□ -1.38
NUP88-213ENST00000576862 ADORA2AP29274 412 aa6.46□□□□□ -1.38
NUP88-213ENST00000576862 PIK3CBP42338 1070 aa6.46□□□□□ -1.38
NUP88-213ENST00000576862 CLCN2P51788 898 aa6.46□□□□□ -1.38
NUP88-213ENST00000576862 ATXN1P54253 815 aaKnown RBP6.46□□□□□ -1.38
NUP88-213ENST00000576862 HTRA4P83105 476 aaPredicted RBP6.46□□□□□ -1.38
NUP88-213ENST00000576862 BMPR2Q13873 1038 aa6.46□□□□□ -1.38
NUP88-213ENST00000576862 SMN1Q16637 294 aaKnown RBP6.46□□□□□ -1.38
NUP88-213ENST00000576862 ZNF618Q5T7W0 954 aa6.46□□□□□ -1.38
NUP88-213ENST00000576862 SLC15A3Q8IY34 581 aa6.46□□□□□ -1.38
NUP88-213ENST00000576862 ATRIPQ8WXE1 791 aa6.46□□□□□ -1.38
NUP88-213ENST00000576862 DUSP26Q9BV47 211 aa6.46□□□□□ -1.38
NUP88-213ENST00000576862 STK31Q9BXU1 1019 aa6.46□□□□□ -1.38
NUP88-213ENST00000576862 CHST8Q9H2A9 424 aa6.46□□□□□ -1.38
NUP88-213ENST00000576862 IL17RBQ9NRM6 502 aa6.46□□□□□ -1.38
NUP88-213ENST00000576862 DNMT3BQ9UBC3 853 aaKnown RBP6.46□□□□□ -1.38
NUP88-213ENST00000576862 RGS17Q9UGC6 210 aaPredicted RBP6.46□□□□□ -1.38
NUP88-213ENST00000576862 ST3GAL5Q9UNP4 418 aa6.46□□□□□ -1.38
NUP88-213ENST00000576862 INSL6Q9Y581 213 aa6.46□□□□□ -1.38
NUP88-213ENST00000576862 SLC16A3O15427 465 aaKnown RBP6.45□□□□□ -1.38
NUP88-213ENST00000576862 NUDT3O95989 172 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 ITPKBP27987 946 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 PDE6CP51160 858 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 SATB1Q01826 763 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 HLTFQ14527 1009 aaKnown RBP eCLIP6.45□□□□□ -1.38
NUP88-213ENST00000576862 SAFBQ15424 915 aaKnown RBP eCLIP6.45□□□□□ -1.38
NUP88-213ENST00000576862 PTCHD3Q3KNS1 767 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 TREML2Q5T2D2 321 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 TEDDM1Q5T9Z0 273 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 KCTD20Q7Z5Y7 419 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 GLG1Q92896 1179 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 PPP2R3CQ969Q6 453 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 ZG16BQ96DA0 208 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 PPP1R9BQ96SB3 815 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 KLK15Q9H2R5 256 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 R3HDMLQ9H3Y0 253 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 RIOX1Q9H6W3 641 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 SERTAD4Q9NUC0 356 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 ZSCAN32Q9NX65 697 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 CORO2BQ9UQ03 480 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 ENTPD2Q9Y5L3 495 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 CDY1Q9Y6F8 540 aa6.45□□□□□ -1.38
NUP88-213ENST00000576862 LOC102723971A0A1B0GUV8 181 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 A1L4Q6 167 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 H7C4K7 107 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 RASSF9O75901 435 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 C1QL1O75973 258 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 IL6RP08887 468 aaPredicted RBP6.44□□□□□ -1.38
NUP88-213ENST00000576862 TXNP10599 105 aaKnown RBP6.44□□□□□ -1.38
NUP88-213ENST00000576862 TBX4P57082 545 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 NPY5RQ15761 445 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 LY6KQ17RY6 165 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 DEPDC1Q5TB30 811 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 ZNF551Q7Z340 670 aaPredicted RBP6.44□□□□□ -1.38
NUP88-213ENST00000576862 ABRAQ8N0Z2 381 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 PJA1Q8NG27 643 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 TMEM171Q8WVE6 324 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 STRBPQ96SI9 672 aaKnown RBP6.44□□□□□ -1.38
NUP88-213ENST00000576862 TIMP4Q99727 224 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 UNKQ9C0B0 810 aaKnown RBP6.44□□□□□ -1.38
NUP88-213ENST00000576862 GBA2Q9HCG7 927 aaPredicted RBP6.44□□□□□ -1.38
NUP88-213ENST00000576862 SEMA4GQ9NTN9 838 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 SLC17A6Q9P2U8 582 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 MID2Q9UJV3 735 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 SNX14Q9Y5W7 946 aa6.44□□□□□ -1.38
NUP88-213ENST00000576862 RHPN2P1A8MT19 583 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 PMM2O15305 246 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 CCP110O43303 1012 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 ORC4O43929 436 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 NXPH3O95157 252 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 FESP07332 822 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 PRKAG1P54619 331 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 FCRL6Q6DN72 434 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 UNC13DQ70J99 1090 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 GRASPQ7Z6J2 395 aaPredicted RBP6.43□□□□□ -1.38
NUP88-213ENST00000576862 PRIMA1Q86XR5 153 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 OSCP1Q8WVF1 389 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms