RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 RPS6KL1Q9Y6S9 549 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 SETSIPP0DME0 302 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 PHKA2P46019 1235 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 DENND5BQ6ZUT9 1274 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 ARMCX2Q7L311 632 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 ZNF677Q86XU0 584 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 PYDC1Q8WXC3 89 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 ZCWPW1Q9H0M4 648 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 ING2Q9H160 280 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 ANKRD26Q9UPS8 1709 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 VCAM1P19320 739 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 EEF1DP29692 281 aaKnown RBP18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 DSG1Q02413 1049 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 NSUN2Q08J23 767 aaKnown RBP eCLIP18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 XRCC4Q13426 336 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 KBTBD12Q3ZCT8 623 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 NUP93Q8N1F7 819 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 FAM151AQ8WW52 585 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 CENPTQ96BT3 561 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 TAS2R40P59535 323 aa18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 DSTYKQ6XUX3 929 aa18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 ARHGAP18Q8N392 663 aa18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 BAG5Q9UL15 447 aa18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 LCA5LO95447 670 aa18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 HSPA8P11142 646 aaKnown RBP18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 IL1R1P14778 569 aa18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 PPM1FP49593 454 aaPredicted RBP18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 NBPF20Q3BBV1 942 aa18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 DCAF6Q58WW2 860 aa18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 RAB44Q7Z6P3 723 aaPredicted RBP18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 BTBD10Q9BSF8 475 aa18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 TEX13BQ9BXU2 312 aa18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 CNTNAP4Q9C0A0 1308 aa18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 DDX3YO15523 660 aaKnown RBP18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 HUS1O60921 280 aa18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 POLNQ7Z5Q5 900 aa18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 SARS2Q9NP81 518 aaKnown RBP18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 ATRNO75882 1429 aa18.61■□□□□ 0.57
ATPAF1-214ENST00000576409 SLC26A4O43511 780 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 AKAP10O43572 662 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 FLOT2Q14254 428 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 DEFB107AQ8IZN7 70 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 SYTL5Q8TDW5 730 aaPredicted RBP18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 FAM136AQ96C01 138 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 CMTM5Q96DZ9 223 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 GMCL1Q96IK5 515 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 ZDHHC15Q96MV8 337 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 SLC12A6Q9UHW9 1150 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 ZMPSTE24O75844 475 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 GPD1P21695 349 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 ASTE1Q2TB18 679 aaPredicted RBP18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 C16orf87Q6PH81 154 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 LRRC74BQ6ZQY2 392 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 SAMD7Q7Z3H4 446 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 DDIASQ8IXT1 998 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 SEMA4DQ92854 862 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 ART4Q93070 314 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 SRPK1Q96SB4 655 aaKnown RBP18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 KCNK16Q96T55 309 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 GLIS2Q9BZE0 524 aaPredicted RBP18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 DDX18Q9NVP1 670 aaKnown RBP18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 APPL1Q9UKG1 709 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 FRMPD4Q14CM0 1322 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 ARHGAP10A1A4S6 786 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 WDR46O15213 610 aaKnown RBP18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 KLC3Q6P597 504 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 USP13Q92995 863 aaPredicted RBP18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 WDR35Q9P2L0 1181 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 AVPR1AP37288 418 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 CLCN3P51790 818 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 EFNA5P52803 228 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 ZBTB41Q5SVQ8 909 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 TWF2Q6IBS0 349 aaKnown RBP18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 SLC26A11Q86WA9 606 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 NETO2Q8NC67 525 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 OTUD5Q96G74 571 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 HSD17B14Q9BPX1 270 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 TIPINQ9BVW5 301 aa18.6■□□□□ 0.57
ATPAF1-214ENST00000576409 DFFAO00273 331 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 XPOTO43592 962 aaKnown RBP18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 KLHL2O95198 593 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 ICAM1P05362 532 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 SLC34A1Q06495 639 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 FASTKD3Q14CZ7 662 aaKnown RBP18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 ARL13BQ3SXY8 428 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 EFHC2Q5JST6 749 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 TMTC4Q5T4D3 741 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 FAM131BQ86XD5 332 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 SCN4BQ8IWT1 228 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 IL31RAQ8NI17 732 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 PDCD6IPQ8WUM4 868 aaKnown RBP18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 PDCD2LQ9BRP1 358 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 UBP1Q9NZI7 540 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 USP18Q9UMW8 372 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 C2CD2Q9Y426 696 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 DTNAQ9Y4J8 743 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 BNIP3LO60238 219 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 STIP1P31948 543 aaKnown RBP18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 DRG2P55039 364 aaKnown RBP18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 DDR1Q08345 913 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms