RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 UGT1A7Q9HAW7 530 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 UGT1A10Q9HAW8 530 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 UGT1A8Q9HAW9 530 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 DNAAF2Q9NVR5 837 aaKnown RBP15.2■□□□□ 0.02
SCARF1-209ENST00000576012 CHCHD3Q9NX63 227 aaKnown RBP15.2■□□□□ 0.02
SCARF1-209ENST00000576012 APPL1Q9UKG1 709 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 PCDHGB4Q9UN71 923 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 SCAF8Q9UPN6 1271 aaKnown RBP15.2■□□□□ 0.02
SCARF1-209ENST00000576012 PCDHGB5Q9Y5G0 923 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 MYPNQ86TC9 1320 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 ATRNL1Q5VV63 1379 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 SPDYE16A6NNV3 312 aaPredicted RBP15.2■□□□□ 0.02
SCARF1-209ENST00000576012 ZNF862O60290 1169 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 POTEJP0CG39 1038 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 PHBP35232 272 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 CDK7P50613 346 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 OTUD4Q01804 1114 aaKnown RBP15.2■□□□□ 0.02
SCARF1-209ENST00000576012 MOXD1Q6UVY6 613 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 POLNQ7Z5Q5 900 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 ALLCQ8N6M5 410 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 ATP11CQ8NB49 1132 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 PHACTR1Q9C0D0 580 aa15.2■□□□□ 0.02
SCARF1-209ENST00000576012 MAGEB3O15480 346 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 LYPLA1O75608 230 aaPredicted RBP15.19■□□□□ 0.02
SCARF1-209ENST00000576012 TMEM63AO94886 807 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 VAV1P15498 845 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 NT5C2P49902 561 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 ABCB5Q2M3G0 1257 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 CST8O60676 142 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 GNA15P30679 374 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 UGCGQ16739 394 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 OR6Y1Q8NGX8 325 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 ACER1Q8TDN7 264 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 SLITRK1Q96PX8 696 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 SRPK1Q96SB4 655 aaKnown RBP15.19■□□□□ 0.02
SCARF1-209ENST00000576012 SENP7Q9BQF6 1050 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 GAKO14976 1311 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 KBTBD13C9JR72 458 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 MYCLP12524 364 aaPredicted RBP15.19■□□□□ 0.02
SCARF1-209ENST00000576012 GMPRP36959 345 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 TMEM62Q0P6H9 643 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 TMPRSS6Q8IU80 811 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 OGFOD1Q8N543 542 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 IL31RAQ8NI17 732 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 NAT14Q8WUY8 206 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 CPT1BQ92523 772 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 ZC3H12CQ9C0D7 883 aaKnown RBP15.19■□□□□ 0.02
SCARF1-209ENST00000576012 HEMK1Q9Y5R4 338 aaPredicted RBP15.19■□□□□ 0.02
SCARF1-209ENST00000576012 RPS6KL1Q9Y6S9 549 aa15.19■□□□□ 0.02
SCARF1-209ENST00000576012 CD48P09326 243 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 CIITAP33076 1130 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 RARRES1P49788 294 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 WNT7BP56706 349 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 BPIFB4P59827 614 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 TTLL12Q14166 644 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-209ENST00000576012 MYBPC3Q14896 1274 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 WDR44Q5JSH3 913 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 EFHC2Q5JST6 749 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 CES4AQ5XG92 561 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 SPOCD1Q6ZMY3 1216 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 DPH6Q7L8W6 267 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 SLC9A9Q8IVB4 645 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 UNC45BQ8IWX7 931 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 GDPD5Q8WTR4 605 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 AGBL1Q96MI9 1066 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 GRIP2Q9C0E4 1043 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 C20orf27Q9GZN8 174 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 TMEM8AQ9HCN3 771 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 ACSS2Q9NR19 701 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 ADAMTS6Q9UKP5 1117 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 CAPN8A6NHC0 703 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 PIK3R2O00459 728 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 SERPINB2P05120 415 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 NELFEP18615 380 aaKnown RBP15.18■□□□□ 0.02
SCARF1-209ENST00000576012 COG7P83436 770 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 ZNF200P98182 395 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-209ENST00000576012 MORF4L2Q15014 288 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 HSF5Q4G112 596 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-209ENST00000576012 MROH9Q5TGP6 573 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 C16orf46Q6P387 395 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 RBM44Q6ZP01 1051 aaKnown RBP15.18■□□□□ 0.02
SCARF1-209ENST00000576012 TSHZ1Q6ZSZ6 1077 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 PDIK1LQ8N165 341 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 EXD1Q8NHP7 514 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 DCAKDQ8WVC6 231 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 PRPF31Q8WWY3 499 aaKnown RBP15.18■□□□□ 0.02
SCARF1-209ENST00000576012 CCDC97Q96F63 343 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-209ENST00000576012 CALN1Q9BXU9 219 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 FAM192AQ9GZU8 254 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 VPS11Q9H270 941 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 SLC24A2Q9UI40 661 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 PROCP04070 461 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 IL1R1P14778 569 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 NCF2P19878 526 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-209ENST00000576012 GK3PQ14409 553 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 PRKD1Q15139 912 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-209ENST00000576012 CMPK2Q5EBM0 449 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 NUDCD3Q8IVD9 361 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 RNF148Q8N7C7 305 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 DCAF4Q8WV16 495 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms