RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 MDGA1Q8NFP4 955 aa10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 SH3RF2Q8TEC5 729 aa10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 PIGKQ92643 395 aa10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 ZSCAN31Q96LW9 406 aaPredicted RBP10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 FNBP1Q96RU3 617 aa10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 ST6GALNAC4Q9H4F1 302 aa10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 TRPC7Q9HCX4 862 aa10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 BLOC1S4Q9NUP1 217 aa10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 TMEM74BQ9NUR3 256 aa10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 GTF3C4Q9UKN8 822 aa10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 AGO2Q9UKV8 859 aaKnown RBP10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 L1RE1Q9UN81 338 aa10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 ARHGAP26Q9UNA1 814 aa10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 MSRB2Q9Y3D2 182 aa10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 NEUROG3Q9Y4Z2 214 aa10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 PCNX2A6NKB5 2137 aa10.72□□□□□ -0.69
CALCOCO2-227ENST00000575560 A0A0A0MRY4 1105 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 FAM221BA6H8Z2 402 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 UPK3BL1B0FP48 263 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 UPK3BL2E5RIL1 263 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 TNFRSF10BO14763 440 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 OBSL1O75147 1896 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 CAPNS1P04632 268 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 HDCP19113 662 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 ADSSP30520 456 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 P2RY2P41231 377 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 PNPLA4P41247 253 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 DHPSP49366 369 aaPredicted RBP10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 SEC13P55735 322 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 SEMA3BQ13214 749 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 UAP1L1Q3KQV9 507 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 CFAP221Q4G0U5 840 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 INTS6LQ5JSJ4 861 aaKnown RBP10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 SPDYCQ5MJ68 293 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 SCARA3Q6AZY7 606 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 PIP4P1Q86T03 277 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 ADGRG2Q8IZP9 1017 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 ASCC3Q8N3C0 2202 aaKnown RBP10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 CCDC33Q8N5R6 958 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 FSIP1Q8NA03 581 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 CXorf38Q8TB03 319 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 AK8Q96MA6 479 aa10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 SMG1Q96Q15 3661 aaKnown RBP10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 DDX43Q9NXZ2 648 aaKnown RBP10.71□□□□□ -0.69
CALCOCO2-227ENST00000575560 ZNF638Q14966 1978 aaKnown RBP10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 THADAQ6YHU6 1953 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 GABRDO14764 452 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 HYAL3O43820 417 aaPredicted RBP10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 HUS1O60921 280 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 IL18RAPO95256 599 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 SEC24BO95487 1268 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 NFATC1O95644 943 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 ACAT1P24752 427 aaKnown RBP10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 PTGER3P43115 390 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 WNT7BP56706 349 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 MRPS21P82921 87 aaKnown RBP10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 MESP2Q0VG99 397 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 DHX8Q14562 1220 aaKnown RBP10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 CCDC142Q17RM4 750 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 TRIM61Q5EBN2 209 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 PEAR1Q5VY43 1037 aaPredicted RBP10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 FAM171BQ6P995 826 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 SLC23A3Q6PIS1 610 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 LPCAT2Q7L5N7 544 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 ZNF720Q7Z2F6 126 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 SYT12Q8IV01 421 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 TMEM86AQ8N2M4 240 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 FRMD1Q8N878 549 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 KIAA1958Q8N8K9 716 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 C1orf127Q8N9H9 656 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 IL17RCQ8NAC3 791 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 TTC16Q8NEE8 873 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 RLN3Q8WXF3 142 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 ZCCHC14Q8WYQ9 949 aaKnown RBP10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 FUBP3Q96I24 572 aaKnown RBP eCLIP10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 ZNF560Q96MR9 790 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 STRA6Q9BX79 667 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 NUSAP1Q9BXS6 441 aaKnown RBP10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 IKZF4Q9H2S9 585 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 SLC32A1Q9H598 525 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 GDAP2Q9NXN4 497 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 MBD1Q9UIS9 605 aaPredicted RBP10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 LHX6Q9UPM6 363 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 AGAP1Q9UPQ3 857 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 MYO16Q9Y6X6 1858 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 KIAA1549LQ6ZVL6 1849 aa10.7□□□□□ -0.7
CALCOCO2-227ENST00000575560 CACNA1EQ15878 2313 aa10.69□□□□□ -0.7
CALCOCO2-227ENST00000575560 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.69□□□□□ -0.7
CALCOCO2-227ENST00000575560 TAF4O00268 1085 aa10.69□□□□□ -0.7
CALCOCO2-227ENST00000575560 PPP1R37O75864 691 aa10.69□□□□□ -0.7
CALCOCO2-227ENST00000575560 ALDH1A2O94788 518 aa10.69□□□□□ -0.7
CALCOCO2-227ENST00000575560 ITGB3P05106 788 aa10.69□□□□□ -0.7
CALCOCO2-227ENST00000575560 ENGP17813 658 aa10.69□□□□□ -0.7
CALCOCO2-227ENST00000575560 PFKLP17858 780 aa10.69□□□□□ -0.7
CALCOCO2-227ENST00000575560 POLR2BP30876 1174 aaKnown RBP10.69□□□□□ -0.7
CALCOCO2-227ENST00000575560 UBA7P41226 1012 aa10.69□□□□□ -0.7
CALCOCO2-227ENST00000575560 MAGEA11P43364 429 aa10.69□□□□□ -0.7
CALCOCO2-227ENST00000575560 KIR2DL1P43626 348 aaPredicted RBP10.69□□□□□ -0.7
CALCOCO2-227ENST00000575560 MYL7Q01449 175 aa10.69□□□□□ -0.7
CALCOCO2-227ENST00000575560 MCM6Q14566 821 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms