RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 CDH8P55286 799 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 OSTNP61366 133 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 MBTD1Q05BQ5 628 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 DNAJC3Q13217 504 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 ZNF667Q5HYK9 610 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 POTEAQ6S8J7 498 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 RPAINQ86UA6 219 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 TMEM192Q8IY95 271 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 ATP11CQ8NB49 1132 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 SLC4A11Q8NBS3 891 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 SPOCK2Q92563 424 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 FGD4Q96M96 766 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 NCAPGQ9BPX3 1015 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 CDT1Q9H211 546 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 METTL5Q9NRN9 209 aaKnown RBP9.39□□□□□ -0.91
NCBP3-204ENST00000574911 TNFSF13BQ9Y275 285 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 SMAPO00193 183 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 EDF1O60869 148 aaKnown RBP9.38□□□□□ -0.91
NCBP3-204ENST00000574911 TRUB2O95900 331 aaKnown RBP9.38□□□□□ -0.91
NCBP3-204ENST00000574911 TSHRP16473 764 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 YARSP54577 528 aaKnown RBP9.38□□□□□ -0.91
NCBP3-204ENST00000574911 TFDP1Q14186 410 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 EFTUD2Q15029 972 aaKnown RBP eCLIP9.38□□□□□ -0.914e-6■■■□□ 19.1
NCBP3-204ENST00000574911 ADGRD1Q6QNK2 874 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 UNC45BQ8IWX7 931 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 EMC1Q8N766 993 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 C1orf127Q8N9H9 656 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 CXorf38Q8TB03 319 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 PYROXD1Q8WU10 500 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 MZB1Q8WU39 189 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 RSAD2Q8WXG1 361 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 MCRS1Q96EZ8 462 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 TWNKQ96RR1 684 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 ELOVL4Q9GZR5 314 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 R3HDMLQ9H3Y0 253 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 RPF1Q9H9Y2 349 aaKnown RBP9.38□□□□□ -0.91
NCBP3-204ENST00000574911 GPRC5DQ9NZD1 345 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 A0A1B0GUA9 196 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 TCRBV7S3A2A0A539 114 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 INO80B-WBP1J3KQ70 363 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 APOC4-APOC2K7ER74 178 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 MICAL2O94851 1124 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 UNC5CO95185 931 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 APOC2P02655 101 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 GJB1P08034 283 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 KRT19P08727 400 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 CXCL8P10145 99 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 EZRP15311 586 aaKnown RBP9.38□□□□□ -0.91
NCBP3-204ENST00000574911 CA4P22748 312 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 MIPP30301 263 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 SSTR1P30872 391 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 MAP2K2P36507 400 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 PTPN11Q06124 597 aaPredicted RBP9.38□□□□□ -0.91
NCBP3-204ENST00000574911 ACAP1Q15027 740 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 E2F5Q15329 346 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 CDR2LQ86X02 465 aaPredicted RBP9.38□□□□□ -0.91
NCBP3-204ENST00000574911 RFX6Q8HWS3 928 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 KIF2BQ8N4N8 673 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 KCTD6Q8NC69 237 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 TRAPPC12Q8WVT3 735 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 NLRP4Q96MN2 994 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 INO80BQ9C086 356 aaPredicted RBP9.38□□□□□ -0.91
NCBP3-204ENST00000574911 MYLK2Q9H1R3 596 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 ACSS3Q9H6R3 686 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 SMYD3Q9H7B4 428 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 TRIM33Q9UPN9 1127 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 USH1CQ9Y6N9 552 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 ANK1P16157 1881 aa9.38□□□□□ -0.91
NCBP3-204ENST00000574911 LACTBL1A8MY62 500 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 GPR25O00155 361 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 CILPO75339 1184 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 TMEM63AO94886 807 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 ZWINTO95229 277 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 NFICP08651 508 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 EIF3EP60228 445 aaKnown RBP9.37□□□□□ -0.91
NCBP3-204ENST00000574911 ORC1Q13415 861 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 TAF5Q15542 800 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 KLHL38Q2WGJ6 581 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 TMEM130Q8N3G9 435 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 FBXO36Q8NEA4 188 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 LRRC8CQ8TDW0 803 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 FBF1Q8TES7 1133 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 DCAKDQ8WVC6 231 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 MRRFQ96E11 262 aaKnown RBP9.37□□□□□ -0.91
NCBP3-204ENST00000574911 TMEM176AQ96HP8 235 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 ZNF668Q96K58 619 aaPredicted RBP9.37□□□□□ -0.91
NCBP3-204ENST00000574911 MINDY3Q9H8M7 445 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 VRTNQ9H8Y1 702 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 SLCO1B3Q9NPD5 702 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 CYLDQ9NQC7 956 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 HMGXB4Q9UGU5 601 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 PCSK1NQ9UHG2 260 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.37□□□□□ -0.91
NCBP3-204ENST00000574911 CHKBQ9Y259 395 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 PTPRFP10586 1907 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 NOP56O00567 594 aaKnown RBP9.37□□□□□ -0.91
NCBP3-204ENST00000574911 IRF6O14896 467 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 ATP5HO75947 161 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 ENDOD1O94919 500 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 IQCF3P0C7M6 154 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms