RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 FNIP1Q8TF40 1166 aa24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 C9orf72Q96LT7 481 aa24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 WDR35Q9P2L0 1181 aa24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 CTNNAL1Q9UBT7 734 aa24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 NRCAMQ92823 1304 aa24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 TREHO43280 583 aa24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 ARSEP51690 589 aa24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 GSCP56915 257 aaPredicted RBP24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 MFSD10Q14728 455 aa24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 GOLGA7BQ2TAP0 167 aa24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 HIBCHQ6NVY1 386 aaPredicted RBP24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 FAM183BPQ6ZVS7 135 aa24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 HSPH1Q92598 858 aa24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 PEBP4Q96S96 227 aa24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 CCT8L2Q96SF2 557 aa24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 SELENOSQ9BQE4 189 aa24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 KLK14Q9P0G3 267 aa24.88■■□□□ 1.57
NPLOC4-217ENST00000574897 RECQL4O94761 1208 aa24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 TTC4O95801 387 aa24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 DARSP14868 501 aaKnown RBP24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 KDELR1P24390 212 aa24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 PTPN7P35236 360 aa24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 VCPP55072 806 aaKnown RBP24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 HUNKP57058 714 aa24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 PLCB3Q01970 1234 aa24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 C15orf59Q2T9L4 293 aaPredicted RBP24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 C6orf118Q5T5N4 469 aa24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 ZNF473Q8WTR7 871 aaKnown RBP24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 TMEM109Q9BVC6 243 aa24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 CST8O60676 142 aa24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 STAU1O95793 577 aaKnown RBP24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 CYP2B6P20813 491 aa24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 OR6B2Q6IFH4 312 aa24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 LCLAT1Q6UWP7 414 aa24.87■■□□□ 1.57
NPLOC4-217ENST00000574897 MBLAC1A4D2B0 266 aaPredicted RBP24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 OTUD4Q01804 1114 aaKnown RBP24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 CAV1Q03135 178 aa24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 MYO1EQ12965 1108 aa24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 GPS1Q13098 491 aa24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 ZBTB6Q15916 424 aa24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 FAM182AQ5T1J6 154 aa24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 DRICH1Q6PGQ1 229 aaPredicted RBP24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 TTC30AQ86WT1 665 aa24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 NT5DC4Q86YG4 428 aa24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 ACTL9Q8TC94 416 aa24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 SLC5A4Q9NY91 659 aa24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 SMIM35A0A1B0GVV1 85 aa24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 IFNB1P01574 187 aa24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 HADHQ16836 314 aaKnown RBP24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 CDO1Q16878 200 aa24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 HP1BP3Q5SSJ5 553 aaPredicted RBP24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 PMF1Q6P1K2 205 aa24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 NOTUMQ6P988 496 aa24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 RNF39Q9H2S5 420 aa24.86■■□□□ 1.57
NPLOC4-217ENST00000574897 EBAG9O00559 213 aa24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 MYL3P08590 195 aa24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 KRT7P08729 469 aa24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 CHN1P15882 459 aa24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 GDF10P55107 478 aa24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 TRIM6Q9C030 488 aaPredicted RBP24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 DPEP3Q9H4B8 488 aa24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 USP18Q9UMW8 372 aa24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 PIN4Q9Y237 131 aaKnown RBP24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 SGK1O00141 431 aa24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 DNALI1O14645 258 aaPredicted RBP24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 ADAM17P78536 824 aa24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 B4GALNT4Q76KP1 1039 aa24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 SLC35B2Q8TB61 432 aa24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 IPO4Q8TEX9 1081 aaKnown RBP24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 RXFP2Q8WXD0 754 aa24.85■■□□□ 1.57
NPLOC4-217ENST00000574897 TRIM66O15016 1216 aa24.84■■□□□ 1.57
NPLOC4-217ENST00000574897 TRAPPC3O43617 180 aa24.84■■□□□ 1.57
NPLOC4-217ENST00000574897 TRUB2O95900 331 aaKnown RBP24.84■■□□□ 1.57
NPLOC4-217ENST00000574897 CREB1P16220 341 aa24.84■■□□□ 1.57
NPLOC4-217ENST00000574897 MMP13P45452 471 aa24.84■■□□□ 1.57
NPLOC4-217ENST00000574897 PSEN2P49810 448 aa24.84■■□□□ 1.57
NPLOC4-217ENST00000574897 YARSP54577 528 aaKnown RBP24.84■■□□□ 1.57
NPLOC4-217ENST00000574897 LMNB2Q03252 620 aa24.84■■□□□ 1.57
NPLOC4-217ENST00000574897 MMRN1Q13201 1228 aa24.84■■□□□ 1.57
NPLOC4-217ENST00000574897 TAF1CQ15572 869 aaPredicted RBP24.84■■□□□ 1.57
NPLOC4-217ENST00000574897 TNFAIP8L3Q5GJ75 292 aa24.84■■□□□ 1.57
NPLOC4-217ENST00000574897 TAB3Q8N5C8 712 aaPredicted RBP24.84■■□□□ 1.57
NPLOC4-217ENST00000574897 NKD2Q969F2 451 aaPredicted RBP24.84■■□□□ 1.57
NPLOC4-217ENST00000574897 PLEKHA5Q9HAU0 1116 aa24.84■■□□□ 1.57
NPLOC4-217ENST00000574897 GOLGA2P5Q9HBQ8 144 aa24.84■■□□□ 1.57
NPLOC4-217ENST00000574897 GABBR2O75899 941 aa24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 AGTP01019 485 aa24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 SNX17Q15036 470 aa24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 CYP4F22Q6NT55 531 aa24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 CYP4V2Q6ZWL3 525 aaPredicted RBP24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 SESTD1Q86VW0 696 aa24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 KCTD6Q8NC69 237 aa24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 RBM15Q96T37 977 aaKnown RBP eCLIP24.83■■□□□ 1.576e-7■■■■□ 22.3
NPLOC4-217ENST00000574897 DRG1Q9Y295 367 aaKnown RBP24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 CEP350Q5VT06 3117 aa24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 MYO1CO00159 1063 aa24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 RNF8O76064 485 aa24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 PECAM1P16284 738 aaPredicted RBP24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 FASTKD3Q14CZ7 662 aaKnown RBP24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 QPCTQ16769 361 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms