RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 INTS13Q9NVM9 706 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 EHD2Q9NZN4 543 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 MAGEC2Q9UBF1 373 aaPredicted RBP13.05□□□□□ -0.32
CCDC40-210ENST00000573903 CDH9Q9ULB4 789 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 MORC2Q9Y6X9 1032 aaPredicted RBP13.05□□□□□ -0.32
CCDC40-210ENST00000573903 HELZP42694 1942 aaKnown RBP13.05□□□□□ -0.32
CCDC40-210ENST00000573903 GABRDO14764 452 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 AXIN1O15169 862 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 EPN2O95208 641 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 ADRB1P08588 477 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 GJA4P35212 333 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 GRIK1P39086 918 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 MAGEA11P43364 429 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 PSMC1P62191 440 aaKnown RBP13.04□□□□□ -0.32
CCDC40-210ENST00000573903 AMPD3Q01432 767 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 USP4Q13107 963 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 ZNF77Q15935 545 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 DUOXA2Q1HG44 320 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 SOWAHAQ2M3V2 549 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 LMBRD2Q68DH5 695 aaPredicted RBP13.04□□□□□ -0.32
CCDC40-210ENST00000573903 PKN3Q6P5Z2 889 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 VSTM1Q6UX27 236 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 OSTM1Q86WC4 334 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 WDR49Q8IV35 697 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 MYLPFQ96A32 169 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 CEP295NLQ96MC4 621 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 CNTNAP3BQ96NU0 1288 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 MMS19Q96T76 1030 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 PKMYT1Q99640 499 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 CNTNAP3Q9BZ76 1288 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 ARRDC1-AS1Q9H2J1 176 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 CUEDC2Q9H467 287 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 SIX4Q9UIU6 781 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 WNT6Q9Y6F9 365 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 SPAG17Q6Q759 2223 aa13.04□□□□□ -0.32
CCDC40-210ENST00000573903 ANAPC1Q9H1A4 1944 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 WDR87Q6ZQQ6 2873 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 OTOL1A6NHN0 477 aaPredicted RBP13.03□□□□□ -0.32
CCDC40-210ENST00000573903 TRIM66O15016 1216 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 NFATC1O95644 943 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 PFKLP17858 780 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 HDCP19113 662 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 NASPP49321 788 aaPredicted RBP13.03□□□□□ -0.32
CCDC40-210ENST00000573903 GALK1P51570 392 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 ASIC1P78348 528 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 CYP27A1Q02318 531 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 ELF2Q15723 593 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 FOXD4L5Q5VV16 416 aaPredicted RBP13.03□□□□□ -0.32
CCDC40-210ENST00000573903 ARL14EPQ8N8R7 260 aaPredicted RBP13.03□□□□□ -0.32
CCDC40-210ENST00000573903 RPLP0P6Q8NHW5 317 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 CXorf38Q8TB03 319 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 RIN3Q8TB24 985 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 SH3RF2Q8TEC5 729 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 FOXD4L4Q8WXT5 416 aaPredicted RBP13.03□□□□□ -0.32
CCDC40-210ENST00000573903 CHFRQ96EP1 664 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 FAM84AQ96KN4 292 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 SPATA17Q96L03 361 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 HHIPQ96QV1 700 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 FNBP1Q96RU3 617 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 FGFBP2Q9BYJ0 223 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 HSPBP1Q9NZL4 362 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 TRPM5Q9NZQ8 1165 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 PCDHGA5Q9Y5G8 931 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 ATG2BQ96BY7 2078 aa13.03□□□□□ -0.32
CCDC40-210ENST00000573903 A0A087X0B3 334 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 EIF3DO15371 548 aaKnown RBP eCLIP13.02□□□□□ -0.33
CCDC40-210ENST00000573903 HCRTO43612 131 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 GDF9O60383 454 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 CLSTN1O94985 981 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 YEATS4O95619 227 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 APBB3O95704 486 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 ZNF806P0C7X5 589 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 TNNI1P19237 187 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 WARSP23381 471 aaKnown RBP13.02□□□□□ -0.33
CCDC40-210ENST00000573903 BDNFP23560 247 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 LIMK1P53667 647 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 TNNC1P63316 161 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 CCDC142Q17RM4 750 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 EML3Q32P44 896 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 ATL3Q6DD88 541 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 FAM171BQ6P995 826 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 DENND5BQ6ZUT9 1274 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 SYT13Q7L8C5 426 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 KBTBD6Q86V97 674 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 CBWD2Q8IUF1 395 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 OR5B17Q8NGF7 314 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 SLC22A12Q96S37 553 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 CYP2S1Q96SQ9 504 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 ARHGAP26Q9UNA1 814 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 KIAA1549LQ6ZVL6 1849 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 MYO16Q9Y6X6 1858 aa13.02□□□□□ -0.33
CCDC40-210ENST00000573903 PTPRDP23468 1912 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 EML5Q05BV3 1969 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 C2orf78A6NCI8 922 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 SPTLC2O15270 562 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 ATP2C2O75185 946 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 RHOBTB1O94844 696 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 PDGFRBP09619 1106 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 DLATP10515 647 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms